RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 DNLZQ5SXM8 178 aa20.05■□□□□ 0.8
RAB40C-211ENST00000568586 SFT2D1Q8WV19 159 aa20.05■□□□□ 0.8
RAB40C-211ENST00000568586 ZC2HC1AQ96GY0 325 aa20.05■□□□□ 0.8
RAB40C-211ENST00000568586 LRP1BQ9NZR2 4599 aa20.05■□□□□ 0.8
RAB40C-211ENST00000568586 CST9LP1Q5W188 147 aa20.04■□□□□ 0.8
RAB40C-211ENST00000568586 TMUB2Q71RG4 321 aa20.04■□□□□ 0.8
RAB40C-211ENST00000568586 FAM213BQ8TBF2 198 aa20.04■□□□□ 0.8
RAB40C-211ENST00000568586 TRBV6-4A0A1B0GX49 114 aa20.03■□□□□ 0.8
RAB40C-211ENST00000568586 K7EP13 123 aa20.03■□□□□ 0.8
RAB40C-211ENST00000568586 LTAP01374 205 aa20.03■□□□□ 0.8
RAB40C-211ENST00000568586 Q6ZRN7 208 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-211ENST00000568586 SLC25A29Q8N8R3 303 aa20.03■□□□□ 0.8
RAB40C-211ENST00000568586 LOC100131303A0A0U1RQF7 123 aa20.02■□□□□ 0.8
RAB40C-211ENST00000568586 PAGE4O60829 102 aa20.02■□□□□ 0.8
RAB40C-211ENST00000568586 LINC00315P59091 139 aa20.02■□□□□ 0.8
RAB40C-211ENST00000568586 ZNF575Q86XF7 245 aa20.02■□□□□ 0.8
RAB40C-211ENST00000568586 IL36BQ9NZH7 164 aa20.02■□□□□ 0.8
RAB40C-211ENST00000568586 KRBOX1C9JBD0 128 aa20.01■□□□□ 0.79
RAB40C-211ENST00000568586 UBE2G1P62253 170 aa20.01■□□□□ 0.79
RAB40C-211ENST00000568586 ZNF674Q2M3X9 581 aa20.01■□□□□ 0.79
RAB40C-211ENST00000568586 RYR1P21817 5038 aa20■□□□□ 0.79
RAB40C-211ENST00000568586 ASIPP42127 132 aa20■□□□□ 0.79
RAB40C-211ENST00000568586 LGALSLQ3ZCW2 172 aaPredicted RBP20■□□□□ 0.79
RAB40C-211ENST00000568586 FAM162BQ5T6X4 162 aa20■□□□□ 0.79
RAB40C-211ENST00000568586 B4DEV8 164 aa19.99■□□□□ 0.79
RAB40C-211ENST00000568586 SH2D1AO60880 128 aa19.99■□□□□ 0.79
RAB40C-211ENST00000568586 DNAH10OSP0CZ25 163 aa19.99■□□□□ 0.79
RAB40C-211ENST00000568586 TPT1P13693 172 aaKnown RBP19.99■□□□□ 0.79
RAB40C-211ENST00000568586 S100A4P26447 101 aaKnown RBP19.99■□□□□ 0.79
RAB40C-211ENST00000568586 ZFP2Q6ZN57 461 aa19.99■□□□□ 0.79
RAB40C-211ENST00000568586 A8MWV9 139 aa19.98■□□□□ 0.79
RAB40C-211ENST00000568586 H2AFB1P0C5Y9 115 aa19.98■□□□□ 0.79
RAB40C-211ENST00000568586 MGST1P10620 155 aaKnown RBP19.98■□□□□ 0.79
RAB40C-211ENST00000568586 RHOHQ15669 191 aa19.98■□□□□ 0.79
RAB40C-211ENST00000568586 WFDC10BQ8IUB3 73 aa19.98■□□□□ 0.79
RAB40C-211ENST00000568586 LY96Q9Y6Y9 160 aa19.98■□□□□ 0.79
RAB40C-211ENST00000568586 TRAV9-2A0A087WT02 112 aa19.97■□□□□ 0.79
RAB40C-211ENST00000568586 PFDN1O60925 122 aa19.97■□□□□ 0.79
RAB40C-211ENST00000568586 S100A9P06702 114 aaKnown RBP19.97■□□□□ 0.79
RAB40C-211ENST00000568586 TCTE3Q8IZS6 198 aa19.97■□□□□ 0.79
RAB40C-211ENST00000568586 PRADC1Q9BSG0 188 aa19.97■□□□□ 0.79
RAB40C-211ENST00000568586 AKR1C3P42330 323 aa19.96■□□□□ 0.79
RAB40C-211ENST00000568586 LINC01559Q495D7 138 aa19.96■□□□□ 0.79
RAB40C-211ENST00000568586 PARLQ9H300 379 aa19.96■□□□□ 0.79
RAB40C-211ENST00000568586 UFSP1Q6NVU6 142 aa19.95■□□□□ 0.78
RAB40C-211ENST00000568586 NHLRC2Q8NBF2 726 aa19.95■□□□□ 0.78
RAB40C-211ENST00000568586 SCRT2Q9NQ03 307 aa19.95■□□□□ 0.78
RAB40C-211ENST00000568586 IGHV3-73A0A0B4J1V6 119 aa19.94■□□□□ 0.78
RAB40C-211ENST00000568586 TRAV1-1A0A0B4J248 108 aa19.94■□□□□ 0.78
RAB40C-211ENST00000568586 DNAH5Q8TE73 4624 aa19.93■□□□□ 0.78
RAB40C-211ENST00000568586 C16orf90A8MZG2 172 aa19.93■□□□□ 0.78
RAB40C-211ENST00000568586 ARMS2P0C7Q2 107 aa19.93■□□□□ 0.78
RAB40C-211ENST00000568586 Q6ZSN1 163 aa19.93■□□□□ 0.78
RAB40C-211ENST00000568586 MLST8Q9BVC4 326 aa19.93■□□□□ 0.78
RAB40C-211ENST00000568586 A0A1B0GV50 99 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 H3BVH4 76 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 M0R036 132 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 EVI2AP22794 236 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 RAB5CP51148 216 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 DMRTA1Q5VZB9 504 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 NFE4Q86UQ8 179 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 HSPG2P98160 4391 aa19.92■□□□□ 0.78
RAB40C-211ENST00000568586 SCO2A0A1W2PP80 73 aa19.91■□□□□ 0.78
RAB40C-211ENST00000568586 Q6ZNX1 250 aa19.91■□□□□ 0.78
RAB40C-211ENST00000568586 BOLA1Q9Y3E2 137 aa19.91■□□□□ 0.78
RAB40C-211ENST00000568586 EIF5AL1Q6IS14 154 aaKnown RBP19.9■□□□□ 0.78
RAB40C-211ENST00000568586 SPATA12Q7Z6I5 190 aa19.9■□□□□ 0.78
RAB40C-211ENST00000568586 TNFRSF18Q9Y5U5 241 aa19.9■□□□□ 0.78
RAB40C-211ENST00000568586 GRIFINA4D1Z8 144 aa19.89■□□□□ 0.77
RAB40C-211ENST00000568586 LINC00694P0DN24 101 aa19.89■□□□□ 0.77
RAB40C-211ENST00000568586 SYT8Q8NBV8 401 aa19.89■□□□□ 0.77
RAB40C-211ENST00000568586 JPT2Q9H910 190 aa19.89■□□□□ 0.77
RAB40C-211ENST00000568586 CCL20P78556 96 aa19.88■□□□□ 0.77
RAB40C-211ENST00000568586 C10orf126Q8N4M7 172 aa19.88■□□□□ 0.77
RAB40C-211ENST00000568586 SAMD10Q9BYL1 202 aa19.88■□□□□ 0.77
RAB40C-211ENST00000568586 MANBALQ9NQG1 85 aa19.88■□□□□ 0.77
RAB40C-211ENST00000568586 MSRB1Q9NZV6 116 aa19.88■□□□□ 0.77
RAB40C-211ENST00000568586 IGHV3-38A0A0C4DH36 116 aa19.87■□□□□ 0.77
RAB40C-211ENST00000568586 KRTAP10-2P60368 255 aa19.87■□□□□ 0.77
RAB40C-211ENST00000568586 LINC01556Q5JQF7 62 aa19.87■□□□□ 0.77
RAB40C-211ENST00000568586 GTSF1LQ9H1H1 148 aa19.87■□□□□ 0.77
RAB40C-211ENST00000568586 RHODO00212 210 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 C1QBP02746 253 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 LELP1Q5T871 98 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 BAGE2Q86Y30 109 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 ATP6V0E2Q8NHE4 81 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 C11orf52Q96A22 123 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 SFRP2Q96HF1 295 aa19.86■□□□□ 0.77
RAB40C-211ENST00000568586 PCLOQ9Y6V0 5065 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 CDK2AP2O75956 126 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 CRYGDP07320 174 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 CXCL1P09341 107 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 SULT1A2P50226 295 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 PHLDA3Q9Y5J5 127 aa19.85■□□□□ 0.77
RAB40C-211ENST00000568586 APOBP04114 4563 aaKnown RBP19.85■□□□□ 0.77
RAB40C-211ENST00000568586 TMSB15BA0A087X1C1 80 aa19.84■□□□□ 0.77
RAB40C-211ENST00000568586 TRAV8-6A0A0B4J262 113 aa19.84■□□□□ 0.77
RAB40C-211ENST00000568586 GNG13Q9P2W3 67 aa19.83■□□□□ 0.77
RAB40C-211ENST00000568586 SLC51BQ86UW2 128 aa19.82■□□□□ 0.76
RAB40C-211ENST00000568586 ZFP82Q8N141 532 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms