RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 C9orf85Q96MD7 179 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
SF3B3-212ENST00000568539 GSN-AS1Q9NRJ2 163 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 V9GYV3 84 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 TENM3Q9P273 2699 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 SORL1Q92673 2214 aa6.05□□□□□ -1.44
SF3B3-212ENST00000568539 GZMBP10144 247 aa6.05□□□□□ -1.44
SF3B3-212ENST00000568539 EMP1P54849 157 aa6.05□□□□□ -1.44
SF3B3-212ENST00000568539 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
SF3B3-212ENST00000568539 CT83Q5H943 113 aa6.05□□□□□ -1.44
SF3B3-212ENST00000568539 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
SF3B3-212ENST00000568539 TIMM8BQ9Y5J9 83 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-212ENST00000568539 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 A0A0J9YWU9 116 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 XKRY2A2RUG3 117 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 A8MWL6 223 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 H3BVH4 76 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 PPP1R2P9O14990 202 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 SNAI2O43623 268 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 APOC3P02656 99 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 MT-ND4LP03901 98 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 ARMS2P0C7Q2 107 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 IGLC6P0CF74 106 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
SF3B3-212ENST00000568539 RNF212Q495C1 297 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 CLRN3Q8NCR9 226 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 SPXQ9BT56 116 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 NOP10Q9NPE3 64 aaKnown RBP6.04□□□□□ -1.44
SF3B3-212ENST00000568539 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 DKK2Q9UBU2 259 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 U3KQK5 164 aa6.04□□□□□ -1.44
SF3B3-212ENST00000568539 AGRNO00468 2067 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 LYRM9A8MSI8 78 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 SPINK4O60575 86 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 OR5AL1P0C617 328 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 CTRLP40313 264 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 FAM222AQ5U5X8 452 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 SVBPQ8N300 66 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 LINC00612Q8N6U2 182 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 FER1L6-AS1Q8NA97 138 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 TSKUQ8WUA8 353 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 PTH2Q96A98 100 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 GFRA4Q9GZZ7 299 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 CELA1Q9UNI1 258 aa6.03□□□□□ -1.44
SF3B3-212ENST00000568539 TEX48A0A1B0GUV7 120 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 A0A1W2PPQ1 181 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 C7orf77A4D0Y5 90 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 FAM231BA6NCW3 169 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 M0R2P5 195 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 SNAPINO95295 136 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 SPART-AS1P0CW21 52 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 FOXA3P55318 350 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-212ENST00000568539 RHEBQ15382 184 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 LGALS9BQ3B8N2 356 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 LYZL1Q6UWQ5 148 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 Q6ZTI0 123 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 OR10AG1Q8NH19 301 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 RASL10AQ92737 203 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 CTDSP1Q9GZU7 261 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 EDA2RQ9HAV5 297 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
SF3B3-212ENST00000568539 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
SF3B3-212ENST00000568539 A0A087WWC5 75 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 TRGV1A0A0A0MS02 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 MUC21A0A0G2JKD1 596 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 MUC21A0A140T8X8 626 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 GAGE12BA1L429 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 CXorf65A6NEN9 183 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 HIGD1CA8MV81 97 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 F2Z2F3 143 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 GAGE7O76087 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 NXPH4O95158 308 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 GAGE12FP0CL80 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 GAGE12GP0CL81 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 GAGE12IP0CL82 117 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 ZNF876PQ49A33 203 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 PIK3CD-AS1Q5SR53 167 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 CNFNQ9BYD5 112 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 RPS10P5Q9NQ39 176 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 TMEM242Q9NWH2 141 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 PHLDA3Q9Y5J5 127 aa6.01□□□□□ -1.45
SF3B3-212ENST00000568539 IGHV4-4A0A075B6R2 117 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 M0R381 172 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 DEFB130BP0DP73 79 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 DEFB130AP0DP74 79 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 C12orf74Q32Q52 190 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 SPANXN1Q5VSR9 72 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 WDR73Q6P4I2 378 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 ATRAIDQ6UW56 229 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 ZFP82Q8N141 532 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 SYT8Q8NBV8 401 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 NUP35Q8NFH5 326 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 C11orf45Q8TAV5 145 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 PGLYRP4Q96LB8 373 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 C18orf15Q96N68 181 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms