RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 GNRH2O43555 120 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 P01737 135 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 AZU1P20160 251 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 RPL23P62829 140 aaKnown RBP5.57□□□□□ -1.52
SMG1-214ENST00000568038 RPL19P84098 196 aaKnown RBP5.57□□□□□ -1.52
SMG1-214ENST00000568038 RRN3P1Q2M238 152 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 PYGO2Q9BRQ0 406 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 RNASE7Q9H1E1 156 aaKnown RBP5.57□□□□□ -1.52
SMG1-214ENST00000568038 TP53TG1Q9Y2A0 90 aa5.57□□□□□ -1.52
SMG1-214ENST00000568038 A0A087WWL8 130 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 GRIFINA4D1Z8 144 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 TMEM189A5PLL7 270 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 C19orf71A6NCJ1 209 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 SMIM9A6NGZ8 99 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 EMP1P54849 157 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 ERVFC1-1P60608 527 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 OR2D3Q8NGH3 330 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 ISOC2Q96AB3 205 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 KCNS1Q96KK3 526 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 SEC11CQ9BY50 192 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 CMYA5Q8N3K9 4069 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 PKD1L1Q8TDX9 2849 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
SMG1-214ENST00000568038 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 KRBOX1C9JBD0 128 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 GATCO43716 136 aaKnown RBP5.55□□□□□ -1.52
SMG1-214ENST00000568038 TYMSP04818 313 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 MIFP14174 115 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 IBA57Q5T440 356 aaKnown RBP5.55□□□□□ -1.52
SMG1-214ENST00000568038 C15orf54Q8N8G6 183 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 SFRP2Q96HF1 295 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 LINC00467Q9BRT7 94 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 GSN-AS1Q9NRJ2 163 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 MDFICQ9P1T7 246 aa5.55□□□□□ -1.52
SMG1-214ENST00000568038 TIMM8BQ9Y5J9 83 aaPredicted RBP5.55□□□□□ -1.52
SMG1-214ENST00000568038 IGHV3-16A0A0C4DH30 117 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 APOC3P02656 99 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 NHLRC4P0CG21 123 aaPredicted RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 GZMBP10144 247 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 S100A4P26447 101 aaKnown RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 ASIPP42127 132 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 PNRC1Q12796 327 aaPredicted RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 TDRG1Q3Y452 100 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 C10orf91Q5T1B1 145 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 FAM231DQ6ZW35 169 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 Q8NAQ8 132 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 OR10G8Q8NGN5 311 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 RNASE8Q8TDE3 154 aaKnown RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 TMEM263Q8WUH6 116 aaKnown RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 C16orf74Q96GX8 76 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 RPP21Q9H633 154 aaKnown RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 OSTCQ9NRP0 149 aa5.54□□□□□ -1.52
SMG1-214ENST00000568038 CARHSP1Q9Y2V2 147 aaKnown RBP5.54□□□□□ -1.52
SMG1-214ENST00000568038 A0A0J9YWU9 116 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 PLAC8L1A1L4L8 177 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 XKRY2A2RUG3 117 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 SNURFLB1AK76 121 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 H3BVH4 76 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 RPS20P60866 119 aaKnown RBP5.53□□□□□ -1.52
SMG1-214ENST00000568038 ZNF415Q09FC8 603 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 ZNF493Q6ZR52 646 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 C11orf72Q8NBR9 251 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 TPPP3Q9BW30 176 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 NOP10Q9NPE3 64 aaKnown RBP5.53□□□□□ -1.52
SMG1-214ENST00000568038 V9GYV3 84 aa5.53□□□□□ -1.52
SMG1-214ENST00000568038 MUC21A0A0G2JKD1 596 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 MUC21A0A140T8X8 626 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 A8MWL6 223 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 MT-ND4LP03901 98 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 ARMS2P0C7Q2 107 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 RNASE3P12724 160 aaKnown RBP5.52□□□□□ -1.53
SMG1-214ENST00000568038 TCL1AP56279 114 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 SSTP61278 116 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 RNF212Q495C1 297 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 FAM222AQ5U5X8 452 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 U3KQK5 164 aa5.52□□□□□ -1.53
SMG1-214ENST00000568038 TRGV1A0A0A0MS02 117 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 C7orf77A4D0Y5 90 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 PPP1R2P9O14990 202 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 CXCL1P09341 107 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 DNLZQ5SXM8 178 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 SVBPQ8N300 66 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 FER1L6-AS1Q8NA97 138 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 TSKUQ8WUA8 353 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 C9orf85Q96MD7 179 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 SPXQ9BT56 116 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 MRPL16Q9NX20 251 aaKnown RBP5.51□□□□□ -1.53
SMG1-214ENST00000568038 IL36BQ9NZH7 164 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 CELA1Q9UNI1 258 aa5.51□□□□□ -1.53
SMG1-214ENST00000568038 CXorf65A6NEN9 183 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 M0R2P5 195 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 M0R381 172 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 GAGE7O76087 117 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 SNAPINO95295 136 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 IGLC6P0CF74 106 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
SMG1-214ENST00000568038 SPART-AS1P0CW21 52 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms