RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 EIF5AL1Q6IS14 154 aaKnown RBP7.66□□□□□ -1.18
CDH3-206ENST00000567674 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 MAP1LC3BQ9GZQ8 125 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 KANTRA0A1W2PQU2 76 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 EREGO14944 169 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 RNASE3P12724 160 aaKnown RBP7.65□□□□□ -1.18
CDH3-206ENST00000567674 GYPEP15421 78 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 ZNF80P51504 273 aaPredicted RBP7.65□□□□□ -1.18
CDH3-206ENST00000567674 CFAP126Q5VTH2 177 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 CDPF1Q6NVV7 123 aa7.65□□□□□ -1.18
CDH3-206ENST00000567674 RHODO00212 210 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 BCL2L11O43521 198 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 EIF3GO75821 320 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDH3-206ENST00000567674 LTAP01374 205 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 CXCL1P09341 107 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 SFTA3P0C7M3 94 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 S100A4P26447 101 aaKnown RBP7.64□□□□□ -1.19
CDH3-206ENST00000567674 ASIPP42127 132 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
CDH3-206ENST00000567674 UBE2G1P62253 170 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 FAM162BQ5T6X4 162 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
CDH3-206ENST00000567674 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 IGKV3D-20A0A0C4DH25 116 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 TEX46H3BTG2 121 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 TPT1P13693 172 aaKnown RBP7.63□□□□□ -1.19
CDH3-206ENST00000567674 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 Q6ZRN7 208 aaPredicted RBP7.63□□□□□ -1.19
CDH3-206ENST00000567674 Q86TA4 180 aa7.63□□□□□ -1.19
CDH3-206ENST00000567674 A0A087WWC5 75 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 TRAV1-1A0A0B4J248 108 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 C16orf90A8MZG2 172 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 B4DEV8 164 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 KRBOX1C9JBD0 128 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 LINC00315P59091 139 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 SMIM12Q96EX1 92 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 SGK494Q96LW2 274 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 LINC00479Q96M42 142 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 GTSF1LQ9H1H1 148 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 SCRT2Q9NQ03 307 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
CDH3-206ENST00000567674 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 IGHV3-38A0A0C4DH36 116 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 PFDN1O60925 122 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 UBE2G2P60604 165 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 ERVFC1-1P60608 527 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 LAGE3Q14657 143 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 LELP1Q5T871 98 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 CST9LP1Q5W188 147 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 MAPKAPK5-AS1Q8N8E1 139 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 SFT2D1Q8WV19 159 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 ZNF471Q9BX82 626 aaPredicted RBP7.61□□□□□ -1.19
CDH3-206ENST00000567674 MSRB1Q9NZV6 116 aa7.61□□□□□ -1.19
CDH3-206ENST00000567674 TRAV34A0A0B4J273 112 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 IBA57-AS1B1ANH7 110 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 CRIP1P50238 77 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 UFSP1Q6NVU6 142 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 TCTE3Q8IZS6 198 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 OR11H4Q8NGC9 324 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 PARLQ9H300 379 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 MANBALQ9NQG1 85 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 HSPG2P98160 4391 aa7.6□□□□□ -1.19
CDH3-206ENST00000567674 PAGE4O60829 102 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 CRYGDP07320 174 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 TAGLN2P37802 199 aaKnown RBP7.59□□□□□ -1.19
CDH3-206ENST00000567674 AKR1C3P42330 323 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 TOR2AQ5JU69 321 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 TMUB2Q71RG4 321 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 SFRP2Q96HF1 295 aa7.59□□□□□ -1.19
CDH3-206ENST00000567674 SH2D1AO60880 128 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 ZNF575Q86XF7 245 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 FAM213BQ8TBF2 198 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 PHLDA3Q9Y5J5 127 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 COX11Q9Y6N1 276 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 DNAH5Q8TE73 4624 aa7.58□□□□□ -1.2
CDH3-206ENST00000567674 PDE6DO43924 150 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 OR5AL1P0C617 328 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 DMRTA1Q5VZB9 504 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 BAGE2Q86Y30 109 aa7.57□□□□□ -1.2
CDH3-206ENST00000567674 WFDC10BQ8IUB3 73 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms