RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 S100A8P05109 93 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 RAB5AP20339 215 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
CLK3-218ENST00000566926 PRR9Q5T870 116 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 LYSTQ99698 3801 aa9.64□□□□□ -0.87
CLK3-218ENST00000566926 DYNC2H1Q8NCM8 4307 aaKnown RBP9.63□□□□□ -0.87
CLK3-218ENST00000566926 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
CLK3-218ENST00000566926 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
CLK3-218ENST00000566926 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
CLK3-218ENST00000566926 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.63□□□□□ -0.87
CLK3-218ENST00000566926 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
CLK3-218ENST00000566926 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 IGKV3D-20A0A0C4DH25 116 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 J3KRW8 73 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
CLK3-218ENST00000566926 MT-ND6P03923 174 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 CTRLP40313 264 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 EMP1P54849 157 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 TCL1AP56279 114 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 FER1L6-AS1Q8NA97 138 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 LINC00467Q9BRT7 94 aa9.62□□□□□ -0.87
CLK3-218ENST00000566926 TRAV12-2A0A075B6T6 113 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 TRAV12-3A0A0B4J271 114 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 OR5AL1P0C617 328 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 IGLC6P0CF74 106 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 ASIPP42127 132 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 RIGQ13278 110 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 C12orf74Q32Q52 190 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 Q6ZTC4 211 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 LINC01587Q99440 93 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 CNFNQ9BYD5 112 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 CELA1Q9UNI1 258 aa9.61□□□□□ -0.87
CLK3-218ENST00000566926 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 TMSB15BA0A087X1C1 80 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 HBBP68871 147 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 ANXA2RQ3ZCQ2 193 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 SSBP4Q9BWG4 385 aaPredicted RBP9.6□□□□□ -0.87
CLK3-218ENST00000566926 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 DKK2Q9UBU2 259 aa9.6□□□□□ -0.87
CLK3-218ENST00000566926 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 IGLL5B9A064 214 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 LY6G6CO95867 125 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
CLK3-218ENST00000566926 RPS10P46783 165 aaKnown RBP9.59□□□□□ -0.87
CLK3-218ENST00000566926 CACNG7P62955 275 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 KIR3DS1Q14943 382 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 FAM222AQ5U5X8 452 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 PGLYRP4Q96LB8 373 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
CLK3-218ENST00000566926 A0A1B0GXF2 115 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 SNAI2O43623 268 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 GZMBP10144 247 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
CLK3-218ENST00000566926 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 DAD1P61803 113 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 C16orf74Q96GX8 76 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 TP53TG3Q9ULZ0 132 aa9.57□□□□□ -0.88
CLK3-218ENST00000566926 GRIFINA4D1Z8 144 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 C1orf196B1AJZ1 125 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 HTN1P15515 57 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 MRPL54Q6P161 138 aaKnown RBP9.56□□□□□ -0.88
CLK3-218ENST00000566926 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 ZNF575Q86XF7 245 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 GATD1Q8NB37 220 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
CLK3-218ENST00000566926 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 PHLDA3Q9Y5J5 127 aa9.56□□□□□ -0.88
CLK3-218ENST00000566926 TIMM8BQ9Y5J9 83 aaPredicted RBP9.56□□□□□ -0.88
CLK3-218ENST00000566926 CBY3A6NI87 242 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 SNURFLB1AK76 121 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 H3BVH4 76 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 ARMS2P0C7Q2 107 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 NDUFAF3Q9BU61 184 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 RYR3Q15413 4870 aa9.55□□□□□ -0.88
CLK3-218ENST00000566926 PLECQ15149 4684 aaKnown RBP9.54□□□□□ -0.88
CLK3-218ENST00000566926 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
CLK3-218ENST00000566926 IGHV3-16A0A0C4DH30 117 aa9.54□□□□□ -0.88
CLK3-218ENST00000566926 SPINK4O60575 86 aa9.54□□□□□ -0.88
CLK3-218ENST00000566926 NXPH4O95158 308 aa9.54□□□□□ -0.88
CLK3-218ENST00000566926 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
CLK3-218ENST00000566926 AZU1P20160 251 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms