RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 LINC00315P59091 139 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 SLAQ13239 276 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 NEGR1Q7Z3B1 354 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 RASL10AQ92737 203 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 ZNF471Q9BX82 626 aaPredicted RBP6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 KANTRA0A1W2PQU2 76 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 A0A1W2PRE2 83 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 FBLL1A6NHQ2 334 aaKnown RBP6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 FAM74A7A6NL05 159 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 K7EQD1 137 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 PFDN1O60925 122 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 FHITP49789 147 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 UBE2G1P62253 170 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 SPATA12Q7Z6I5 190 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 SUN5Q8TC36 379 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
GTF3C1-206ENST00000566779 TMSB15BA0A087X1C1 80 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 H3BVH4 76 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 ORM1P02763 201 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 ASIPP42127 132 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 AKR1C3P42330 323 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 ZNF506Q5JVG8 444 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 TXNDC17Q9BRA2 123 aa6.93□□□□□ -1.3
GTF3C1-206ENST00000566779 A0A1W2PPQ1 181 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 PGPEP1LA6NFU8 196 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 B4DEV8 164 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 BCL2L11O43521 198 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 PAGE4O60829 102 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 OR11H4Q8NGC9 324 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 TNFRSF18Q9Y5U5 241 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
GTF3C1-206ENST00000566779 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 SH2D1AO60880 128 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 GATA1P15976 413 aaPredicted RBP6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 ZNF345Q14585 488 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 CFAP126Q5VTH2 177 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 HIST1H2BAQ96A08 127 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 ZC2HC1AQ96GY0 325 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 C9orf85Q96MD7 179 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 DNAH2Q9P225 4427 aa6.91□□□□□ -1.3
GTF3C1-206ENST00000566779 HERC2O95714 4834 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 IGKV3D-20A0A0C4DH25 116 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 RS1O15537 224 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 EVI2AP22794 236 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 RHOHQ15669 191 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 FAM74A4Q5TZK3 123 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 SLC25A29Q8N8R3 303 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 FMC1Q96HJ9 113 aa6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 NKX6-2Q9C056 277 aaPredicted RBP6.9□□□□□ -1.3
GTF3C1-206ENST00000566779 TRAV9-2A0A087WT02 112 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 A0A0D9SG52 128 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 M0R381 172 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 IGHV3-30-3P0DP02 117 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 RNASE3P12724 160 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 GCSHP23434 173 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 ERVFC1-1P60608 527 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 PRR27Q6MZM9 219 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 JPT2Q9H910 190 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 Q9HAA7 133 aa6.89□□□□□ -1.31
GTF3C1-206ENST00000566779 FAT2Q9NYQ8 4349 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 GAGE12JA6NER3 117 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 CRYGDP07320 174 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 SEC11BP0C7V7 166 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 DNAH10OSP0CZ25 163 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 TPT1P13693 172 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 EIF5AP63241 154 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 GAGE1Q13065 139 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 GAGE4Q13068 117 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 GAGE5Q13069 117 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 TMUB2Q71RG4 321 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 PARLQ9H300 379 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms