RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 NUPR1O60356 82 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 SAP30O75446 220 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 S100A4P26447 101 aaKnown RBP6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 SPANXN1Q5VSR9 72 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 Q6ZQT7 251 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 TRPT1Q86TN4 253 aaKnown RBP6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 OR10D4PQ8NGN7 298 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 MRAP2Q96G30 205 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 GSN-AS1Q9NRJ2 163 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 SELENOKQ9Y6D0 94 aa6.53□□□□□ -1.36
LSM3P5-201ENST00000566307 SORL1Q92673 2214 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 TRAV12-3A0A0B4J271 114 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 LINC01546A6NGU7 62 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 M0R2Z0 102 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 M0R381 172 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 PDZD11Q5EBL8 140 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 RCHY1Q96PM5 261 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 C12orf57Q99622 126 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 MSRB1Q9NZV6 116 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 NAGKQ9UJ70 344 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
LSM3P5-201ENST00000566307 D6R8Y8 96 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 J3KRW8 73 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 GNRH2O43555 120 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 HSBP1O75506 76 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 INSP01308 110 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 CD7P09564 240 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 LINC00614P0C842 121 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 CKS2P33552 79 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 NUTF2P61970 127 aaKnown RBP6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 IQCJQ1A5X6 159 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 MUC21Q5SSG8 566 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 NIT1Q86X76 327 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 WFDC9Q8NEX5 89 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 MCRIP2Q9BUT9 160 aaKnown RBP6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 AGRNO00468 2067 aa6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 SETXQ7Z333 2677 aaKnown RBP6.51□□□□□ -1.37
LSM3P5-201ENST00000566307 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 PPP1R17O96001 155 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 EVI2AP22794 236 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 AMTP48728 403 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 MORN3Q6PF18 240 aaPredicted RBP6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 STHQ8IWL8 128 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 Q8N1Y9 231 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 SYT8Q8NBV8 401 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 SAMD10Q9BYL1 202 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 NXT2Q9NPJ8 142 aaKnown RBP6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 KIF25-AS1Q9Y6Z4 181 aa6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 FLNBO75369 2602 aaKnown RBP6.5□□□□□ -1.37
LSM3P5-201ENST00000566307 TRAV12-2A0A075B6T6 113 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 MUC21A0A140T8X8 626 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 H3BS24 57 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 K7EMI3 77 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 IGKV3-20P01619 116 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1A1P0DJD3 496 aaKnown RBP6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1CP0DJD4 496 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 ODF1Q14990 250 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 RBMY1FQ15415 496 aaKnown RBP6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 C20orf78Q9BR46 151 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 SPXQ9BT56 116 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 EDA2RQ9HAV5 297 aa6.49□□□□□ -1.37
LSM3P5-201ENST00000566307 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 NPYP01303 97 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 LINC00315P59091 139 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 S100A12P80511 92 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 ZNF415Q09FC8 603 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 RNASEKQ6P5S7 137 aaKnown RBP6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 Q6ZWC4 215 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 FA2HQ7L5A8 372 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 NRACQ8N912 160 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 ZNF747Q9BV97 191 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 MUC4Q99102 2169 aa6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
LSM3P5-201ENST00000566307 IGHV1-24A0A0C4DH33 117 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms