RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-206ENST00000565990 F6UB75 175 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 M0R2Z0 102 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 M0R3E3 92 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 SPINK4O60575 86 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 IGLV2-11P01706 119 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 RPS20P60866 119 aaKnown RBP9.27□□□□□ -0.93
SF3B3-206ENST00000565990 PRR27Q6MZM9 219 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 EBLN2Q6P2I7 272 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 MRAPQ8TCY5 172 aa9.27□□□□□ -0.93
SF3B3-206ENST00000565990 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
SF3B3-206ENST00000565990 DUSP14O95147 198 aaKnown RBP9.26□□□□□ -0.93
SF3B3-206ENST00000565990 CA1P00915 261 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-206ENST00000565990 STHQ8IWL8 128 aa9.26□□□□□ -0.93
SF3B3-206ENST00000565990 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
SF3B3-206ENST00000565990 TMEM70Q9BUB7 260 aa9.26□□□□□ -0.93
SF3B3-206ENST00000565990 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
SF3B3-206ENST00000565990 RBAKDNA6NC62 111 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-206ENST00000565990 LINC00614P0C842 121 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 CSN1S1P47710 185 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 SAPCD1Q5SSQ6 148 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-206ENST00000565990 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 ZNF493Q6ZR52 646 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 C9orf47Q6ZRZ4 202 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 OR2D3Q8NGH3 330 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 GTSF1Q8WW33 167 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 HSPB8Q9UJY1 196 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
SF3B3-206ENST00000565990 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 NTF3P20783 257 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 CAMPP49913 170 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
SF3B3-206ENST00000565990 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
SF3B3-206ENST00000565990 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 B9D2Q9BPU9 175 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 AGPAT4-IT1Q9H0P7 198 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
SF3B3-206ENST00000565990 DLEU1O43261 78 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 APOC4P55056 127 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 SPATA12Q7Z6I5 190 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 SBSPONQ8IVN8 264 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 OR10J6PQ8NGY7 276 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 PGLYRP4Q96LB8 373 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 FAM19A4Q96LR4 140 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 VGLL1Q99990 258 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
SF3B3-206ENST00000565990 TRBV7-9A0A0J9YWB2 115 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 LEPROTL1O95214 131 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
SF3B3-206ENST00000565990 TDRG1Q3Y452 100 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 CSNK1G2-AS1Q8NCQ2 148 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 PMCHL2Q9BQD1 86 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
SF3B3-206ENST00000565990 PRB4P10163 310 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-206ENST00000565990 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-206ENST00000565990 ERCC8Q13216 396 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 Q6ZN92 141 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
SF3B3-206ENST00000565990 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 IGKV2-40A0A087WW87 121 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-206ENST00000565990 IGHV1-24A0A0C4DH33 117 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 IGKV2D-40P01614 121 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-206ENST00000565990 IGKV3-20P01619 116 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 TSPOP30536 169 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 SSBP4Q9BWG4 385 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-206ENST00000565990 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 U3KQK5 164 aa9.2□□□□□ -0.94
SF3B3-206ENST00000565990 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-206ENST00000565990 ZNF138P52744 262 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 RNF183Q96D59 192 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
SF3B3-206ENST00000565990 PRKDCP78527 4128 aaKnown RBP9.18□□□□□ -0.94
SF3B3-206ENST00000565990 KLLNB2CW77 178 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 ZNF25P17030 456 aaPredicted RBP9.18□□□□□ -0.94
SF3B3-206ENST00000565990 CDKN1BP46527 198 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 TMEM78Q5T7P6 136 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms