RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 A0A087WWC5 75 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 TRGV1A0A0A0MS02 117 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 A0A0J9YWU9 116 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 C7orf77A4D0Y5 90 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 CXorf65A6NEN9 183 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 SNAI2O43623 268 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 OR5AL1P0C617 328 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 RNASE3P12724 160 aaKnown RBP5.59□□□□□ -1.51
CDH1-208ENST00000565810 S100PP25815 95 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 CACNG7P62955 275 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 LGALS9BQ3B8N2 356 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 SPANXN1Q5VSR9 72 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 KCNIP4Q6PIL6 250 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 ZFP82Q8N141 532 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 C9orf85Q96MD7 179 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 SSBP4Q9BWG4 385 aaPredicted RBP5.59□□□□□ -1.51
CDH1-208ENST00000565810 TMEM242Q9NWH2 141 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 NAT8BQ9UHF3 227 aa5.59□□□□□ -1.51
CDH1-208ENST00000565810 TRGV2A0A075B6R0 118 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 HIGD1CA8MV81 97 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 M0R381 172 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 SPINK4O60575 86 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 S100A1P23297 94 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 FOXA3P55318 350 aaPredicted RBP5.58□□□□□ -1.52
CDH1-208ENST00000565810 SSTP61278 116 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 DAD1P61803 113 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 ZNF876PQ49A33 203 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 FAM222AQ5U5X8 452 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 WDR73Q6P4I2 378 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 LYZL1Q6UWQ5 148 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 SMIM15Q7Z3B0 74 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 ZNF575Q86XF7 245 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 NUP35Q8NFH5 326 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 GTSF1Q8WW33 167 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 PTH2Q96A98 100 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 PGLYRP4Q96LB8 373 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 IMMP2LQ96T52 175 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 NDUFAF3Q9BU61 184 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 SCRT2Q9NQ03 307 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
CDH1-208ENST00000565810 MUC21A0A0G2JKD1 596 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 MUC21A0A140T8X8 626 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 A0A1B0GUT8 65 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 SMIM27A0A1W2PRY6 76 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 GAGE12BA1L429 117 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 PLAC8L1A1L4L8 177 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 GAGE7O76087 117 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 GAGE12FP0CL80 117 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 GAGE12GP0CL81 117 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 GAGE12IP0CL82 117 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 SMIM17P0DL12 118 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 DEFB130BP0DP73 79 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 DEFB130AP0DP74 79 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 CTRLP40313 264 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 RIGQ13278 110 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 TWIST1Q15672 202 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 PIK3CD-AS1Q5SR53 167 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 DMRTA1Q5VZB9 504 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 IL17DQ8TAD2 202 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 C11orf45Q8TAV5 145 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 RASL10AQ92737 203 aa5.57□□□□□ -1.52
CDH1-208ENST00000565810 MRPL16Q9NX20 251 aaKnown RBP5.57□□□□□ -1.52
CDH1-208ENST00000565810 MEGF8Q7Z7M0 2845 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 A8MWV9 139 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 ATP6V1G1O75348 118 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 S100A8P05109 93 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 TRGC1P0CF51 173 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 Q6ZTI0 123 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 OR4C5Q8NGB2 326 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 BTF3L4Q96K17 158 aa5.56□□□□□ -1.52
CDH1-208ENST00000565810 NBEAL2Q6ZNJ1 2754 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 IGHV4-4A0A075B6R2 117 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 TRAV9-1A0A075B6T8 112 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 TRAV4A0A0B4J268 109 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 A0A1B0GW15 77 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 CIDEAO60543 219 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 NTF3P20783 257 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 FAM3BP58499 235 aaPredicted RBP5.55□□□□□ -1.52
CDH1-208ENST00000565810 C12orf74Q32Q52 190 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 ATP5L2Q7Z4Y8 100 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 LINC00612Q8N6U2 182 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 C18orf15Q96N68 181 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 AP1S3Q96PC3 154 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 SMCO4Q9NRQ5 59 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 URGCP-MRPS24S4R325 110 aa5.55□□□□□ -1.52
CDH1-208ENST00000565810 RHODO00212 210 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 RS1O15537 224 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 NXPH4O95158 308 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 ATP5G1P05496 136 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 NANOS2P60321 138 aaKnown RBP5.54□□□□□ -1.52
CDH1-208ENST00000565810 SLAQ13239 276 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 MRPL54Q6P161 138 aaKnown RBP5.54□□□□□ -1.52
CDH1-208ENST00000565810 ATRAIDQ6UW56 229 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 EDA2RQ9HAV5 297 aa5.54□□□□□ -1.52
CDH1-208ENST00000565810 TRGV4A0A0C4DH28 118 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms