RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
USB1-211ENST00000565662 DNAH17Q9UFH2 4485 aa11.49□□□□□ -0.57
USB1-211ENST00000565662 RHODO00212 210 aa11.48□□□□□ -0.57
USB1-211ENST00000565662 RS1O15537 224 aa11.48□□□□□ -0.57
USB1-211ENST00000565662 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
USB1-211ENST00000565662 DNLZQ5SXM8 178 aa11.48□□□□□ -0.57
USB1-211ENST00000565662 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
USB1-211ENST00000565662 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
USB1-211ENST00000565662 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
USB1-211ENST00000565662 AKR1C3P42330 323 aa11.47□□□□□ -0.57
USB1-211ENST00000565662 RAB5CP51148 216 aa11.47□□□□□ -0.57
USB1-211ENST00000565662 ZNF80P51504 273 aaPredicted RBP11.47□□□□□ -0.57
USB1-211ENST00000565662 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
USB1-211ENST00000565662 CFAP126Q5VTH2 177 aa11.47□□□□□ -0.57
USB1-211ENST00000565662 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
USB1-211ENST00000565662 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 B4DEV8 164 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 DNAH10OSP0CZ25 163 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 LINC00315P59091 139 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 ERVFC1-1P60608 527 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 KRTAP1-5Q9BYS1 174 aa11.46□□□□□ -0.57
USB1-211ENST00000565662 RNASE3P12724 160 aaKnown RBP11.45□□□□□ -0.58
USB1-211ENST00000565662 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
USB1-211ENST00000565662 FAM213BQ8TBF2 198 aa11.45□□□□□ -0.58
USB1-211ENST00000565662 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 CDK2AP2O75956 126 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 LTAP01374 205 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 SLC25A29Q8N8R3 303 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 SFT2D1Q8WV19 159 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 MANBALQ9NQG1 85 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 PKHD1P08F94 4074 aa11.44□□□□□ -0.58
USB1-211ENST00000565662 CXCL1P09341 107 aa11.43□□□□□ -0.58
USB1-211ENST00000565662 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
USB1-211ENST00000565662 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
USB1-211ENST00000565662 OR11H4Q8NGC9 324 aa11.43□□□□□ -0.58
USB1-211ENST00000565662 LINC00479Q96M42 142 aa11.43□□□□□ -0.58
USB1-211ENST00000565662 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 ZNF674Q2M3X9 581 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 ZC2HC1AQ96GY0 325 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
USB1-211ENST00000565662 A0A087WWC5 75 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 KRBOX1C9JBD0 128 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 PAGE4O60829 102 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 CRYGDP07320 174 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 LELP1Q5T871 98 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 ZNF575Q86XF7 245 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 ZFP82Q8N141 532 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 PARLQ9H300 379 aa11.41□□□□□ -0.58
USB1-211ENST00000565662 SMLR1H3BR10 107 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 SH2D1AO60880 128 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 LAGE3Q14657 143 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 SPATA12Q7Z6I5 190 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 PGPEP1Q9NXJ5 209 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 PKD1P98161 4303 aa11.4□□□□□ -0.58
USB1-211ENST00000565662 H3BVH4 76 aa11.39□□□□□ -0.59
USB1-211ENST00000565662 Q6ZRN7 208 aaPredicted RBP11.39□□□□□ -0.59
USB1-211ENST00000565662 WFDC10BQ8IUB3 73 aa11.39□□□□□ -0.59
USB1-211ENST00000565662 TCTE3Q8IZS6 198 aa11.39□□□□□ -0.59
USB1-211ENST00000565662 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
USB1-211ENST00000565662 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
USB1-211ENST00000565662 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
USB1-211ENST00000565662 IFNA1P01562 189 aa11.38□□□□□ -0.59
USB1-211ENST00000565662 ARMS2P0C7Q2 107 aa11.38□□□□□ -0.59
USB1-211ENST00000565662 TAGLN2P37802 199 aaKnown RBP11.38□□□□□ -0.59
USB1-211ENST00000565662 TOR2AQ5JU69 321 aa11.38□□□□□ -0.59
USB1-211ENST00000565662 TRBV10-1A0A0K0K1A3 114 aa11.37□□□□□ -0.59
USB1-211ENST00000565662 M0R036 132 aa11.37□□□□□ -0.59
USB1-211ENST00000565662 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
USB1-211ENST00000565662 SCRT2Q9NQ03 307 aa11.37□□□□□ -0.59
USB1-211ENST00000565662 HERC2O95714 4834 aa11.37□□□□□ -0.59
USB1-211ENST00000565662 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
USB1-211ENST00000565662 BAGE2Q86Y30 109 aa11.36□□□□□ -0.59
USB1-211ENST00000565662 BIN3Q9NQY0 253 aa11.36□□□□□ -0.59
USB1-211ENST00000565662 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 PSCAO43653 123 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 PDE6DO43924 150 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 CRIP1P50238 77 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 SFRP2Q96HF1 295 aa11.35□□□□□ -0.59
USB1-211ENST00000565662 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 IBA57-AS1B1ANH7 110 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 MLST8Q9BVC4 326 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
USB1-211ENST00000565662 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms