RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 A0A1B0GU33 70 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 NUPR1O60356 82 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 DSCR4P56555 118 aaPredicted RBP2.86□□□□□ -1.95
CHD9-214ENST00000565119 HEPN1Q6WQI6 88 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 TMEM136Q6ZRR5 245 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 Q8NAQ8 132 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 KLF14Q8TD94 323 aaPredicted RBP2.86□□□□□ -1.95
CHD9-214ENST00000565119 TMEM141Q96I45 108 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 MGST2Q99735 147 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 CYTL1Q9NRR1 136 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 SPCS1Q9Y6A9 102 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 ARHGAP21Q5T5U3 1957 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 EPRSP07814 1512 aaKnown RBP2.86□□□□□ -1.95
CHD9-214ENST00000565119 UGGT2Q9NYU1 1516 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
CHD9-214ENST00000565119 PCNX2A6NKB5 2137 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 COL27A1Q8IZC6 1860 aaPredicted RBP2.86□□□□□ -1.95
CHD9-214ENST00000565119 ABCA7Q8IZY2 2146 aa2.86□□□□□ -1.95
CHD9-214ENST00000565119 PPRC1Q5VV67 1664 aaKnown RBP2.85□□□□□ -1.95
CHD9-214ENST00000565119 SCN3AQ9NY46 2000 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 LMTK2Q8IWU2 1503 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 DISP1Q96F81 1524 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 C11orf86A6NJI1 115 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 E7EUB6 86 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 CRPP02741 224 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 HINT1P49773 126 aaPredicted RBP2.85□□□□□ -1.95
CHD9-214ENST00000565119 ZNF345Q14585 488 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 RHOHQ15669 191 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 ZNF826PQ6ZT77 177 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 OR10AG1Q8NH19 301 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 NDUFA12Q9UI09 145 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 ABCA8O94911 1581 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 PLXNA2O75051 1894 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 KIF14Q15058 1648 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 MROH1Q8NDA8 1641 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 KIAA1549Q9HCM3 1950 aa2.85□□□□□ -1.95
CHD9-214ENST00000565119 SNRNP200O75643 2136 aaKnown RBP2.84□□□□□ -1.95
CHD9-214ENST00000565119 LCTP09848 1927 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 CFAP74Q9C0B2 1584 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 SHROOM2Q13796 1616 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 MAP3K4Q9Y6R4 1608 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 IGLV10-54A0A075B6I4 117 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 HMSDA8MTL9 139 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 CISD3P0C7P0 127 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 BAALC-AS2P0C853 105 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 DEFA4P12838 97 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 FAUP35544 74 aaKnown RBP2.84□□□□□ -1.95
CHD9-214ENST00000565119 EIF4EBP1Q13541 118 aaPredicted RBP2.84□□□□□ -1.95
CHD9-214ENST00000565119 BVES-AS1Q5T3Y7 98 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 ARPINQ7Z6K5 226 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 HMGN2P46Q86SG4 172 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 SERP2Q8N6R1 65 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 CYB561D1Q8N8Q1 229 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 UBALD1Q8TB05 177 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 MUCL1Q96DR8 90 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 AMELYQ99218 206 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 TRGV9Q99603 122 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 TET3O43151 1660 aa2.84□□□□□ -1.95
CHD9-214ENST00000565119 MYH4Q9Y623 1939 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 MYO18AQ92614 2054 aaKnown RBP2.83□□□□□ -1.96
CHD9-214ENST00000565119 MUC4Q99102 2169 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.83□□□□□ -1.96
CHD9-214ENST00000565119 IGHV3-64A0A075B6Q5 118 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 TRAV17A0A0B4J275 112 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 LOC107984156A0A0G2JMH3 177 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 CCL16O15467 120 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 NDUFC1O43677 76 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 MIFP14174 115 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 ADCYAP1P18509 176 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
CHD9-214ENST00000565119 LGALSLQ3ZCW2 172 aaPredicted RBP2.83□□□□□ -1.96
CHD9-214ENST00000565119 SPANXN5Q5MJ07 72 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 Q6ZS52 159 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 ARL17AQ8IVW1 177 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 LINC01600Q96MT4 127 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 BLMP54132 1417 aaPredicted RBP2.83□□□□□ -1.96
CHD9-214ENST00000565119 MLH3Q9UHC1 1453 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 NRXN1Q9ULB1 1477 aa2.83□□□□□ -1.96
CHD9-214ENST00000565119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-214ENST00000565119 LAMB1P07942 1786 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 NAP1L6A6NFF2 107 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 IL4P05112 153 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 GNGT1P63211 74 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 ETDBQ3ZM63 59 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 FAM213BQ8TBF2 198 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 NDUFB11Q9NX14 153 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 COL1A2P08123 1366 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 GOLGA3Q08378 1498 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 TNS1Q9HBL0 1735 aaKnown RBP2.82□□□□□ -1.96
CHD9-214ENST00000565119 SCN11AQ9UI33 1791 aa2.82□□□□□ -1.96
CHD9-214ENST00000565119 IGKV1D-42A0A075B6H8 117 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 C5orf67F2Z3F1 127 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 SYS1-DBNDD2H3BUS1 97 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 ZNF861PO60384 105 aa2.81□□□□□ -1.96
CHD9-214ENST00000565119 MGST1P10620 155 aaKnown RBP2.81□□□□□ -1.96
CHD9-214ENST00000565119 NMSQ5H8A3 153 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms