RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 IGHV3-16A0A0C4DH30 117 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 H3BVH4 76 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-205ENST00000564899 DEFB135Q30KP9 77 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 DNLZQ5SXM8 178 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-205ENST00000564899 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
SF3B3-205ENST00000564899 C3orf84H3BNL1 204 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 SNAI2O43623 268 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 SPINK4O60575 86 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 PRM2P04554 102 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 OR5AL1P0C617 328 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 CTRLP40313 264 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 BORCS7Q96B45 105 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 YPEL4Q96NS1 127 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 RCHY1Q96PM5 261 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 MDFICQ9P1T7 246 aa8.02□□□□□ -1.13
SF3B3-205ENST00000564899 ALMS1Q8TCU4 4167 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 MUC21A0A0G2JKD1 596 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 MUC21A0A140T8X8 626 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 A0A1B0GUT8 65 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 F2Z2F3 143 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 RNASE3P12724 160 aaKnown RBP8.01□□□□□ -1.13
SF3B3-205ENST00000564899 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
SF3B3-205ENST00000564899 Q6ZWC4 215 aa8.01□□□□□ -1.13
SF3B3-205ENST00000564899 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-205ENST00000564899 LCE6AA0A183 80 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 AZU1P20160 251 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 CACNG7P62955 275 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 RIGQ13278 110 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 RRN3P1Q2M238 152 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 SPANXN1Q5VSR9 72 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 ATP5L2Q7Z4Y8 100 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 SREK1IP1Q8N9Q2 155 aaPredicted RBP8□□□□□ -1.13
SF3B3-205ENST00000564899 OR10AG1Q8NH19 301 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 MUC7Q8TAX7 377 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 RNASE8Q8TDE3 154 aaKnown RBP8□□□□□ -1.13
SF3B3-205ENST00000564899 TMEM263Q8WUH6 116 aaKnown RBP8□□□□□ -1.13
SF3B3-205ENST00000564899 RNF183Q96D59 192 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 C16orf74Q96GX8 76 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 FAM210BQ96KR6 192 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 C9orf85Q96MD7 179 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 SCRT2Q9NQ03 307 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 GSN-AS1Q9NRJ2 163 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 PHLDA3Q9Y5J5 127 aa8□□□□□ -1.13
SF3B3-205ENST00000564899 COLCA2A8K830 154 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 SPRY2O43597 315 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 SSTP61278 116 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 ZNF493Q6ZR52 646 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 OR11H2Q8NH07 326 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 CNFNQ9BYD5 112 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 X6R8D5 127 aa7.99□□□□□ -1.13
SF3B3-205ENST00000564899 A0A1B0GW15 77 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 SMIM9A6NGZ8 99 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 SNURFLB1AK76 121 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 M0R381 172 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 CAMPP49913 170 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 HBBP68871 147 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 TWIST1Q15672 202 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 WDR73Q6P4I2 378 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 ZFP82Q8N141 532 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 SPXQ9BT56 116 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
SF3B3-205ENST00000564899 IGHV4-4A0A075B6R2 117 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 M0R2P5 195 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 NXPH4O95158 308 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 S100A8P05109 93 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 NHLRC4P0CG21 123 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-205ENST00000564899 RAB5AP20339 215 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 NTF3P20783 257 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 ZFAND6Q6FIF0 208 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 IL17DQ8TAD2 202 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 RETNQ9HD89 108 aa7.97□□□□□ -1.13
SF3B3-205ENST00000564899 PLAC8L1A1L4L8 177 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 MIFP14174 115 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 RAB4BP61018 213 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 COX19Q49B96 90 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 SBSPONQ8IVN8 264 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 MSRB1Q9NZV6 116 aa7.96□□□□□ -1.14
SF3B3-205ENST00000564899 IGHV4-28A0A0C4DH34 117 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 RPS10P46783 165 aaKnown RBP7.95□□□□□ -1.14
SF3B3-205ENST00000564899 EMP1P54849 157 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 ZNF876PQ49A33 203 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 TMEM136Q6ZRR5 245 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 SMIM15Q7Z3B0 74 aa7.95□□□□□ -1.14
SF3B3-205ENST00000564899 PTH2Q96A98 100 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms