RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 BCL9LQ86UU0 1499 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 TRAV23DV6A0A075B6W5 121 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 TRBV30A0A0K0K1B3 111 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 TEX49A0A1B0GTD5 131 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 EFCAB10A6NFE3 127 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 J3QLW9 94 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 K7EP13 123 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 NPFFO15130 113 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 NDUFA2O43678 99 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 LINC00694P0DN24 101 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 COX4I1P13073 169 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 POLR2JP52435 117 aaKnown RBP0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 CAV3P56539 151 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 LINC01545Q5VT33 79 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 Q6ZS92 163 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 C1orf54Q8WWF1 131 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCL19Q99731 98 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 TMEM191AQ9H0A3 160 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 ERG28Q9UKR5 140 aa0.44□□□□□ -2.34
HMGB1P33-201ENST00000563485 ZNF142P52746 1687 aaPredicted RBP0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 GRIN2AQ12879 1464 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 ESPL1Q14674 2120 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 DLEC1Q9Y238 1755 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 MYH13Q9UKX3 1938 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 A0A096LNT2 108 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 PITX3O75364 302 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 GUCA1AP43080 201 aaPredicted RBP0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 FXYD6P3P58550 94 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 RPS25P62851 125 aaKnown RBP0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 SELENOWP63302 87 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 FXYD3Q14802 87 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 SPINK13Q1W4C9 94 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCDC58Q4VC31 144 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 CLLU1Q5K131 121 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 VSTM2AQ8TAG5 236 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 SDF2Q99470 211 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 SMIM3Q9BZL3 60 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCDC167Q9P0B6 97 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 NOP16Q9Y3C1 178 aaKnown RBP0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 SOGA1O94964 1423 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 MYOM3Q5VTT5 1437 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 TRPM7Q96QT4 1865 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
HMGB1P33-201ENST00000563485 LRP5O75197 1615 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 CDK12Q9NYV4 1490 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 SYNJ1O43426 1573 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 BICRAQ9NZM4 1560 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 FAM236AA0A1B0GUQ0 79 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 FAM236BA0A1B0GV22 79 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 MCRIP1C9JLW8 97 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 ZNF670-ZNF695F2Z2N8 137 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 COPZ1P61923 177 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 BTG2P78543 158 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 KLKP1Q107X0 134 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 OR2T2Q6IF00 324 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 UNQ5815/PRO19632Q6UWF5 114 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 SNX29P2Q8IUI4 249 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 PPP1R1CQ8WVI7 109 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 MYH6P13533 1939 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 LAMB1P07942 1786 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 CASZ1Q86V15 1759 aa0.42□□□□□ -2.34
HMGB1P33-201ENST00000563485 PTPRMP28827 1452 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 ERCC6Q03468 1493 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 DAPK1P53355 1430 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 TRAV12-2A0A075B6T6 113 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 IGKCP01834 107 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 APOC1P02654 83 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 CCKP06307 115 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 PYYP10082 97 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 RRAS2P62070 204 aaPredicted RBP0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 SPINK9Q5DT21 86 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 Q6ZUT4 128 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 TSTD1Q8NFU3 115 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 PLAC4Q8WY50 150 aa0.41□□□□□ -2.34
HMGB1P33-201ENST00000563485 ZNF462Q96JM2 2506 aa0.4□□□□□ -2.34
HMGB1P33-201ENST00000563485 KDM6BO15054 1643 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 LOC101927531A0A1B0GV80 90 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 K7ERU9 68 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 SLC25A6P12236 298 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 RPL37P61927 97 aaKnown RBP0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 EMX2Q04743 252 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 SPCS2Q15005 226 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 ZNF56Q15929 161 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 SPANXN1Q5VSR9 72 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 DPH3Q96FX2 82 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 LINC00208Q96KT6 92 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 SNRNP25Q9BV90 132 aaKnown RBP0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 LINC00470Q9BZP3 86 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 AFDNP55196 1824 aaKnown RBP0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 KIF13AQ9H1H9 1805 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 ABCA1O95477 2261 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 MED13LQ71F56 2210 aa0.4□□□□□ -2.35
HMGB1P33-201ENST00000563485 NAV3Q8IVL0 2385 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 MAP2P11137 1827 aaKnown RBP0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 APODP05090 189 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 IL7P13232 177 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 SLC48A1Q6P1K1 146 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 COPS9Q8WXC6 57 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 TMEM141Q96I45 108 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms