RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 TRBV6-4A0A1B0GX49 114 aa9.58□□□□□ -0.88
SMPD3-204ENST00000563396 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
SMPD3-204ENST00000563396 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
SMPD3-204ENST00000563396 SH2D6Q7Z4S9 175 aa9.58□□□□□ -0.88
SMPD3-204ENST00000563396 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 BCL2L11O43521 198 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 RHOHQ15669 191 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 STOML3Q8TAV4 291 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 FMC1Q96HJ9 113 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 ZFP30Q9Y2G7 519 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 HSPG2P98160 4391 aa9.57□□□□□ -0.88
SMPD3-204ENST00000563396 A0A0D9SG52 128 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 IL36BQ9NZH7 164 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 LY96Q9Y6Y9 160 aa9.56□□□□□ -0.88
SMPD3-204ENST00000563396 LTAP01374 205 aa9.55□□□□□ -0.88
SMPD3-204ENST00000563396 MGST1P10620 155 aaKnown RBP9.55□□□□□ -0.88
SMPD3-204ENST00000563396 ASIPP42127 132 aa9.55□□□□□ -0.88
SMPD3-204ENST00000563396 CRIP1P50238 77 aa9.55□□□□□ -0.88
SMPD3-204ENST00000563396 MBD3L1Q8WWY6 194 aa9.55□□□□□ -0.88
SMPD3-204ENST00000563396 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
SMPD3-204ENST00000563396 KANTRA0A1W2PQU2 76 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 A8MWV9 139 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 LINC00694P0DN24 101 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 ZNF674Q2M3X9 581 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 ZNF471Q9BX82 626 aaPredicted RBP9.54□□□□□ -0.88
SMPD3-204ENST00000563396 PARLQ9H300 379 aa9.54□□□□□ -0.88
SMPD3-204ENST00000563396 TRAV9-2A0A087WT02 112 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 B4DEV8 164 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 KRBOX1C9JBD0 128 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 SH2D1AO60880 128 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 S100A4P26447 101 aaKnown RBP9.53□□□□□ -0.88
SMPD3-204ENST00000563396 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 UBE2G1P62253 170 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 FAM213BQ8TBF2 198 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
SMPD3-204ENST00000563396 H3BVH4 76 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 PAGE4O60829 102 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 EVI2AP22794 236 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 AKR1C3P42330 323 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.89
SMPD3-204ENST00000563396 CST9LP1Q5W188 147 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 SCRT2Q9NQ03 307 aa9.52□□□□□ -0.89
SMPD3-204ENST00000563396 TPT1P13693 172 aaKnown RBP9.51□□□□□ -0.89
SMPD3-204ENST00000563396 LINC01556Q5JQF7 62 aa9.51□□□□□ -0.89
SMPD3-204ENST00000563396 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
SMPD3-204ENST00000563396 MSRB1Q9NZV6 116 aa9.51□□□□□ -0.89
SMPD3-204ENST00000563396 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 M0R036 132 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 RHODO00212 210 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
SMPD3-204ENST00000563396 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
SMPD3-204ENST00000563396 MLST8Q9BVC4 326 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 TNFRSF18Q9Y5U5 241 aa9.5□□□□□ -0.89
SMPD3-204ENST00000563396 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 PFDN1O60925 122 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 CRYGDP07320 174 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 CXCL1P09341 107 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 ARMS2P0C7Q2 107 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 LELP1Q5T871 98 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 TMUB2Q71RG4 321 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
SMPD3-204ENST00000563396 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 Q6ZSN1 163 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 TCTE3Q8IZS6 198 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 C11orf52Q96A22 123 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 JPT2Q9H910 190 aa9.48□□□□□ -0.89
SMPD3-204ENST00000563396 A0A087WTM6 91 aa9.47□□□□□ -0.89
SMPD3-204ENST00000563396 TRAV1-1A0A0B4J248 108 aa9.47□□□□□ -0.89
SMPD3-204ENST00000563396 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
SMPD3-204ENST00000563396 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
SMPD3-204ENST00000563396 MANBALQ9NQG1 85 aa9.47□□□□□ -0.89
SMPD3-204ENST00000563396 A0A1B0GV50 99 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 EREGO14944 169 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 RAB5CP51148 216 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 LAGE3Q14657 143 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms