RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TRAV10A0A0B4J240 114 aa13.37□□□□□ -0.27
RAB40C-207ENST00000563109 TMEM218A2RU14 115 aa13.37□□□□□ -0.27
RAB40C-207ENST00000563109 PHLDA1Q8WV24 401 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-207ENST00000563109 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
RAB40C-207ENST00000563109 NUPR2A6NF83 97 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 F8W036 122 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 ATP5G1P05496 136 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 HTN3P15516 51 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 PNRC1Q12796 327 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-207ENST00000563109 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 RASL10AQ92737 203 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 SFRP2Q96HF1 295 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 NDUFAF3Q9BU61 184 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 TPPP3Q9BW30 176 aa13.36□□□□□ -0.27
RAB40C-207ENST00000563109 DEFB131BA0A096LNP1 70 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 GZMBP10144 247 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 CT83Q5H943 113 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 ZFP82Q8N141 532 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 FER1L6-AS1Q8NA97 138 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 PTH2Q96A98 100 aa13.35□□□□□ -0.27
RAB40C-207ENST00000563109 A0A1W2PPQ1 181 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 A8MWL6 223 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 ZNF575Q86XF7 245 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 SCRT2Q9NQ03 307 aa13.34□□□□□ -0.27
RAB40C-207ENST00000563109 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
RAB40C-207ENST00000563109 M0R381 172 aa13.33□□□□□ -0.28
RAB40C-207ENST00000563109 SNAI2O43623 268 aa13.33□□□□□ -0.28
RAB40C-207ENST00000563109 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.28
RAB40C-207ENST00000563109 SEC11CQ9BY50 192 aa13.33□□□□□ -0.28
RAB40C-207ENST00000563109 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 F5H768 121 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 IGLC6P0CF74 106 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 SPANXN1Q5VSR9 72 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 CEMP1Q6PRD7 247 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-207ENST00000563109 OR4C5Q8NGB2 326 aa13.32□□□□□ -0.28
RAB40C-207ENST00000563109 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-207ENST00000563109 DNAH7Q8WXX0 4024 aa13.31□□□□□ -0.28
RAB40C-207ENST00000563109 MUC4Q99102 2169 aa13.31□□□□□ -0.28
RAB40C-207ENST00000563109 F2Z2F3 143 aa13.31□□□□□ -0.28
RAB40C-207ENST00000563109 SSBP4Q9BWG4 385 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-207ENST00000563109 A8MWV9 139 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 IGHV3-53P01767 116 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 CACNG7P62955 275 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 OR10AG1Q8NH19 301 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 V9GYV3 84 aa13.3□□□□□ -0.28
RAB40C-207ENST00000563109 PPP1R2P9O14990 202 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 NXPH4O95158 308 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 CTRLP40313 264 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 BORCS7Q96B45 105 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 GFRA4Q9GZZ7 299 aa13.29□□□□□ -0.28
RAB40C-207ENST00000563109 TRGV4A0A0C4DH28 118 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 MUC21A0A0G2JKD1 596 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 MUC21A0A140T8X8 626 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 RS1O15537 224 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 CIDEAO60543 219 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 LYZL1Q6UWQ5 148 aa13.28□□□□□ -0.28
RAB40C-207ENST00000563109 FAM231BA6NCW3 169 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 MT-ND4LP03901 98 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 SSTP61278 116 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 ZNF479Q96JC4 524 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
RAB40C-207ENST00000563109 IGLL5B9A064 214 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 RHODO00212 210 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 SLAQ13239 276 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 RNF212Q495C1 297 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 CASC10Q5T4H9 136 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 PGLYRP4Q96LB8 373 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 AP1S3Q96PC3 154 aa13.26□□□□□ -0.29
RAB40C-207ENST00000563109 CARHSP1Q9Y2V2 147 aaKnown RBP13.26□□□□□ -0.29
RAB40C-207ENST00000563109 HIGD1CA8MV81 97 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 HOXA5P20719 270 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 WDR73Q6P4I2 378 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
RAB40C-207ENST00000563109 SMIM17P0DL12 118 aa13.24□□□□□ -0.29
RAB40C-207ENST00000563109 FAM74A4Q5TZK3 123 aa13.24□□□□□ -0.29
RAB40C-207ENST00000563109 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
RAB40C-207ENST00000563109 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
RAB40C-207ENST00000563109 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 IGHV3-73A0A0B4J1V6 119 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 TRGC1P0CF51 173 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
RAB40C-207ENST00000563109 FHL2Q14192 279 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 TWIST1Q15672 202 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 CNFNQ9BYD5 112 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 JPT2Q9H910 190 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 PRO0255Q9UI72 69 aa13.23□□□□□ -0.29
RAB40C-207ENST00000563109 NACAE9PAV3 2078 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms