RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PAGE4O60829 102 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 GCGP01275 180 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 IGHV3-53P01767 116 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 TPT1P13693 172 aaKnown RBP4.06□□□□□ -1.76
CDH13-206ENST00000562601 NKX2-5P52952 324 aaPredicted RBP4.06□□□□□ -1.76
CDH13-206ENST00000562601 FLI1Q01543 452 aaPredicted RBP4.06□□□□□ -1.76
CDH13-206ENST00000562601 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
CDH13-206ENST00000562601 Q6AWC8 147 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 FAM159AQ6UWV7 190 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 ARL6IP6Q8N6S5 226 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 LINC00612Q8N6U2 182 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 CYB561D1Q8N8Q1 229 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 TMEM75Q8N9X5 138 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 ZNF680Q8NEM1 530 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 STOML3Q8TAV4 291 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 ATG101Q9BSB4 218 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 LENEPQ9Y5L5 61 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 MUC4Q99102 2169 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 TRAV26-1A0A087WT03 109 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 SERTM2A0A1B0GWG4 89 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 UMAD1C9J7I0 102 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 M0R2N4 97 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 SPINK4O60575 86 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 TYMSP04818 313 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 TCL1AP56279 114 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 TCTAP57738 103 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 EIF5AP63241 154 aaKnown RBP4.05□□□□□ -1.76
CDH13-206ENST00000562601 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 ZFP69Q49AA0 526 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 SMUG1Q53HV7 270 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 DPPA3Q6W0C5 159 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 UBE2DNLQ8IWF7 75 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 C9orf62Q8N4C0 152 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 NHLRC2Q8NBF2 726 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 NDFIP1Q9BT67 221 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 ARL2-SNX15V9GYD0 113 aa4.05□□□□□ -1.76
CDH13-206ENST00000562601 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 IGLV2-18A0A075B6J9 118 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 SFTA3P0C7M3 94 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 P0DMU3 169 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 FAM231AP0DMU4 169 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 FAM231CP0DMU5 169 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 CRIP1P50238 77 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 PPT1P50897 306 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 SAPCD1Q5SSQ6 148 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 IBA57Q5T440 356 aaKnown RBP4.04□□□□□ -1.76
CDH13-206ENST00000562601 Q86TA4 180 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 SLC51BQ86UW2 128 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 POM121L12Q8N7R1 296 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 HIST1H2BAQ96A08 127 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 ZC2HC1AQ96GY0 325 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 FAM210BQ96KR6 192 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 NKX6-2Q9C056 277 aaPredicted RBP4.04□□□□□ -1.76
CDH13-206ENST00000562601 SDF2L1Q9HCN8 221 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 GNG13Q9P2W3 67 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 PKD1P98161 4303 aa4.04□□□□□ -1.76
CDH13-206ENST00000562601 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 A0A096LPF7 62 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 GRIFINA4D1Z8 144 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 C9JCJ5 164 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 M0R036 132 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 ORM1P02763 201 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 PFN1P07737 140 aaKnown RBP4.03□□□□□ -1.76
CDH13-206ENST00000562601 AKR1C3P42330 323 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 SULT1A2P50226 295 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 UBE2G1P62253 170 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 TDRG1Q3Y452 100 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 ALKAL2Q6UX46 152 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 C15orf53Q8NAA6 179 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 FMC1Q96HJ9 113 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 VSIG2Q96IQ7 327 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 ZNF479Q96JC4 524 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 KCNS1Q96KK3 526 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 SPXQ9BT56 116 aa4.03□□□□□ -1.76
CDH13-206ENST00000562601 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 IGHV3-73A0A0B4J1V6 119 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 IGKV3D-20A0A0C4DH25 116 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 FBLL1A6NHQ2 334 aaKnown RBP4.02□□□□□ -1.77
CDH13-206ENST00000562601 FABP5P3A8MUU1 101 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 B4DEV8 164 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 M0R2P5 195 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 SH2D1AO60880 128 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 LTAP01374 205 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 RAB5CP51148 216 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 LGALS9BQ3B8N2 356 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 EIF5AL1Q6IS14 154 aaKnown RBP4.02□□□□□ -1.77
CDH13-206ENST00000562601 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 LINC00588Q9Y4M8 146 aa4.02□□□□□ -1.77
CDH13-206ENST00000562601 TRAV1-1A0A0B4J248 108 aa4.01□□□□□ -1.77
CDH13-206ENST00000562601 RAB19A4D1S5 217 aa4.01□□□□□ -1.77
CDH13-206ENST00000562601 KRBOX1C9JBD0 128 aa4.01□□□□□ -1.77
CDH13-206ENST00000562601 H3BVH4 76 aa4.01□□□□□ -1.77
CDH13-206ENST00000562601 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
CDH13-206ENST00000562601 S100A4P26447 101 aaKnown RBP4.01□□□□□ -1.77
CDH13-206ENST00000562601 RPL35P42766 123 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms