RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 IL7P13232 177 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 POLR2JP52435 117 aaKnown RBP0.26□□□□□ -2.37
CHD9-204ENST00000561869 KLKP1Q107X0 134 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 C6orf52Q5T4I8 152 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 ATP11AUNQ6ZP68 121 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 NDUFA11Q86Y39 141 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
CHD9-204ENST00000561869 KRTAP2-4Q9BYR9 128 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 KRTAP2-1Q9BYU5 128 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 CCDC171Q6TFL3 1326 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 PRG4Q92954 1404 aaPredicted RBP0.26□□□□□ -2.37
CHD9-204ENST00000561869 PLXNA2O75051 1894 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 BDP1A6H8Y1 2624 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 MEGF8Q7Z7M0 2845 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 AFDNP55196 1824 aaKnown RBP0.25□□□□□ -2.37
CHD9-204ENST00000561869 KCPQ6ZWJ8 1503 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 PTPRMP28827 1452 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 DISP2A7MBM2 1401 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 TRBV20-1A0A075B6N2 111 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 TEX49A0A1B0GTD5 131 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 LY6G6CO95867 125 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 NCR2O95944 276 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 RBP4P02753 201 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 PRH1P02810 166 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 CCKP06307 115 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 CKS1BP61024 79 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 HIST1H1AQ02539 215 aaPredicted RBP0.25□□□□□ -2.37
CHD9-204ENST00000561869 ZNF56Q15929 161 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 CLLU1Q5K131 121 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 UNQ5815/PRO19632Q6UWF5 114 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 VPS25Q9BRG1 176 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 PLAC8Q9NZF1 115 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 GSKIPQ9P0R6 139 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 JMJD1CQ15652 2540 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 MED13LQ71F56 2210 aa0.25□□□□□ -2.37
CHD9-204ENST00000561869 CASZ1Q86V15 1759 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 RREB1Q92766 1687 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 ADGRB1O14514 1584 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 SYNJ1O43426 1573 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 FHAD1B1AJZ9 1412 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 IGLC6P0CF74 106 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 MPC1LP0DKB6 136 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 SNX29P2Q8IUI4 249 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 MMGT1Q8N4V1 131 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 DYNLRB2Q8TF09 96 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 TMEM14BQ9NUH8 114 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 NOP16Q9Y3C1 178 aaKnown RBP0.24□□□□□ -2.37
CHD9-204ENST00000561869 USP24Q9UPU5 2620 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 MAP2P11137 1827 aaKnown RBP0.24□□□□□ -2.37
CHD9-204ENST00000561869 ANK2Q01484 3957 aa0.24□□□□□ -2.37
CHD9-204ENST00000561869 ZNF142P52746 1687 aaPredicted RBP0.24□□□□□ -2.37
CHD9-204ENST00000561869 ERCC6Q03468 1493 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 TRAV17A0A0B4J275 112 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 CCDC179H3BU77 68 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 J3QLW9 94 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 PITX3O75364 302 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 PYYP10082 97 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 SPINK7P58062 85 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 NCS1P62166 190 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 EMX2Q04743 252 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 IQCJQ1A5X6 159 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 OR2T2Q6IF00 324 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 SMR3AQ99954 134 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 SAR1AQ9NR31 198 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 ERG28Q9UKR5 140 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 BCORL1Q5H9F3 1711 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
CHD9-204ENST00000561869 CDK5RAP2Q96SN8 1893 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 LOC285556D6RIA3 1793 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 TRAV12-2A0A075B6T6 113 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 FAM236AA0A1B0GUQ0 79 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 FAM236BA0A1B0GV22 79 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 FXYD1O00168 92 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 LINC00694P0DN24 101 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 SLC25A6P12236 298 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 SMIM21Q3B7S5 101 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 LINC01545Q5VT33 79 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 MAFIPQ8WZ33 124 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 ANP32BQ92688 251 aaKnown RBP0.22□□□□□ -2.37
CHD9-204ENST00000561869 SMIM3Q9BZL3 60 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
CHD9-204ENST00000561869 AKAP11Q9UKA4 1901 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 MYH13Q9UKX3 1938 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 A0A087WTM6 91 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 MCRIP1C9JLW8 97 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 APOC1P02654 83 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 ELOF1P60002 83 aaKnown RBP0.21□□□□□ -2.38
CHD9-204ENST00000561869 CTAGE3PQ8IX95 158 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 VSTM2AQ8TAG5 236 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 PPP1R1CQ8WVI7 109 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 LZICQ8WZA0 190 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 IFI27L1Q96BM0 104 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 BET1LQ9NYM9 111 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 COPZ2Q9P299 210 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 PIEZO1Q92508 2521 aa0.21□□□□□ -2.38
CHD9-204ENST00000561869 TMEM2Q9UHN6 1383 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms