RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 FAM3BP58499 235 aaPredicted RBP16.94■□□□□ 0.3
TMEM249-201ENST00000561638 ZNF705AQ6ZN79 300 aaPredicted RBP16.94■□□□□ 0.3
TMEM249-201ENST00000561638 RETNQ9HD89 108 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 K7EN84 100 aa16.93■□□□□ 0.3
TMEM249-201ENST00000561638 OR11H2Q8NH07 326 aa16.93■□□□□ 0.3
TMEM249-201ENST00000561638 SPATA25Q9BR10 227 aa16.93■□□□□ 0.3
TMEM249-201ENST00000561638 PYGO2Q9BRQ0 406 aa16.93■□□□□ 0.3
TMEM249-201ENST00000561638 ORM1P02763 201 aa16.92■□□□□ 0.3
TMEM249-201ENST00000561638 TP53TG1Q9Y2A0 90 aa16.92■□□□□ 0.3
TMEM249-201ENST00000561638 URGCP-MRPS24S4R325 110 aa16.92■□□□□ 0.3
TMEM249-201ENST00000561638 EREGO14944 169 aa16.92■□□□□ 0.3
TMEM249-201ENST00000561638 SNHG12Q9BXW3 62 aa16.92■□□□□ 0.3
TMEM249-201ENST00000561638 IGHV1OR15-1A0A075B7D0 117 aa16.91■□□□□ 0.3
TMEM249-201ENST00000561638 RPL23P62829 140 aaKnown RBP16.91■□□□□ 0.3
TMEM249-201ENST00000561638 OVOL2Q9BRP0 275 aa16.91■□□□□ 0.3
TMEM249-201ENST00000561638 ZMAT4Q9H898 229 aa16.91■□□□□ 0.3
TMEM249-201ENST00000561638 SDF2L1Q9HCN8 221 aa16.91■□□□□ 0.3
TMEM249-201ENST00000561638 CBY3A6NI87 242 aa16.9■□□□□ 0.3
TMEM249-201ENST00000561638 TM2D3Q9BRN9 247 aa16.9■□□□□ 0.3
TMEM249-201ENST00000561638 P01737 135 aa16.89■□□□□ 0.3
TMEM249-201ENST00000561638 XKRY2A2RUG3 117 aa16.89■□□□□ 0.29
TMEM249-201ENST00000561638 RRN3P1Q2M238 152 aa16.89■□□□□ 0.29
TMEM249-201ENST00000561638 ANXA2RQ3ZCQ2 193 aa16.89■□□□□ 0.29
TMEM249-201ENST00000561638 IBA57Q5T440 356 aaKnown RBP16.89■□□□□ 0.29
TMEM249-201ENST00000561638 KCNS1Q96KK3 526 aa16.89■□□□□ 0.29
TMEM249-201ENST00000561638 RNASE7Q9H1E1 156 aaKnown RBP16.89■□□□□ 0.29
TMEM249-201ENST00000561638 PRM2P04554 102 aa16.88■□□□□ 0.29
TMEM249-201ENST00000561638 IMMP2LQ96T52 175 aa16.88■□□□□ 0.29
TMEM249-201ENST00000561638 C11orf21Q9P2W6 132 aa16.88■□□□□ 0.29
TMEM249-201ENST00000561638 TMSB15BA0A087X1C1 80 aa16.87■□□□□ 0.29
TMEM249-201ENST00000561638 C21orf62-AS1Q17RA5 79 aa16.87■□□□□ 0.29
TMEM249-201ENST00000561638 X6R8D5 127 aa16.87■□□□□ 0.29
TMEM249-201ENST00000561638 FBN3Q75N90 2809 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 TMEM189A5PLL7 270 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 C19orf71A6NCJ1 209 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 SMIM9A6NGZ8 99 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 TDRG1Q3Y452 100 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 NUDT10Q8NFP7 164 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 NUDT11Q96G61 164 aa16.86■□□□□ 0.29
TMEM249-201ENST00000561638 IGKV3D-20A0A0C4DH25 116 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 RPL19P84098 196 aaKnown RBP16.85■□□□□ 0.29
TMEM249-201ENST00000561638 LINC01559Q495D7 138 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 OR2D3Q8NGH3 330 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 ANAPC16Q96DE5 110 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 LINC00467Q9BRT7 94 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 TP53TG3Q9ULZ0 132 aa16.85■□□□□ 0.29
TMEM249-201ENST00000561638 A0A1W2PPQ1 181 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 MIFP14174 115 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 KCNIP4Q6PIL6 250 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 SFRP2Q96HF1 295 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 TRGV11A0A075B6L2 103 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 AZU1P20160 251 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 COL5A1-AS1Q5SY13 56 aa16.84■□□□□ 0.29
TMEM249-201ENST00000561638 TMEM263Q8WUH6 116 aaKnown RBP16.84■□□□□ 0.29
TMEM249-201ENST00000561638 GNRH2O43555 120 aa16.83■□□□□ 0.28
TMEM249-201ENST00000561638 TYMSP04818 313 aa16.83■□□□□ 0.28
TMEM249-201ENST00000561638 EMP1P54849 157 aa16.83■□□□□ 0.28
TMEM249-201ENST00000561638 FAM231DQ6ZW35 169 aa16.83■□□□□ 0.28
TMEM249-201ENST00000561638 C16orf74Q96GX8 76 aa16.83■□□□□ 0.28
TMEM249-201ENST00000561638 RPP21Q9H633 154 aaKnown RBP16.83■□□□□ 0.28
TMEM249-201ENST00000561638 NHLRC4P0CG21 123 aaPredicted RBP16.82■□□□□ 0.28
TMEM249-201ENST00000561638 S100A4P26447 101 aaKnown RBP16.82■□□□□ 0.28
TMEM249-201ENST00000561638 IGHV4-28A0A0C4DH34 117 aa16.82■□□□□ 0.28
TMEM249-201ENST00000561638 GRIFINA4D1Z8 144 aa16.82■□□□□ 0.28
TMEM249-201ENST00000561638 ASIPP42127 132 aa16.82■□□□□ 0.28
TMEM249-201ENST00000561638 ZNF493Q6ZR52 646 aa16.82■□□□□ 0.28
TMEM249-201ENST00000561638 OSTCQ9NRP0 149 aa16.82■□□□□ 0.28
TMEM249-201ENST00000561638 DEFB4AO15263 64 aa16.81■□□□□ 0.28
TMEM249-201ENST00000561638 SCGB1D1O95968 90 aa16.81■□□□□ 0.28
TMEM249-201ENST00000561638 OR10G8Q8NGN5 311 aa16.81■□□□□ 0.28
TMEM249-201ENST00000561638 RNASE8Q8TDE3 154 aaKnown RBP16.81■□□□□ 0.28
TMEM249-201ENST00000561638 MIEN1Q9BRT3 115 aa16.81■□□□□ 0.28
TMEM249-201ENST00000561638 ZNF415Q09FC8 603 aa16.8■□□□□ 0.28
TMEM249-201ENST00000561638 MDFICQ9P1T7 246 aa16.8■□□□□ 0.28
TMEM249-201ENST00000561638 TIMM8BQ9Y5J9 83 aaPredicted RBP16.8■□□□□ 0.28
TMEM249-201ENST00000561638 SNURFLB1AK76 121 aa16.79■□□□□ 0.28
TMEM249-201ENST00000561638 RPS20P60866 119 aaKnown RBP16.79■□□□□ 0.28
TMEM249-201ENST00000561638 Q8NAQ8 132 aa16.79■□□□□ 0.28
TMEM249-201ENST00000561638 PRKDCP78527 4128 aaKnown RBP16.79■□□□□ 0.28
TMEM249-201ENST00000561638 IGHV3-16A0A0C4DH30 117 aa16.78■□□□□ 0.28
TMEM249-201ENST00000561638 TENM3Q9P273 2699 aa16.78■□□□□ 0.28
TMEM249-201ENST00000561638 TPPP3Q9BW30 176 aa16.77■□□□□ 0.28
TMEM249-201ENST00000561638 H3BVH4 76 aa16.77■□□□□ 0.27
TMEM249-201ENST00000561638 C11orf72Q8NBR9 251 aa16.77■□□□□ 0.27
TMEM249-201ENST00000561638 A8MWL6 223 aa16.76■□□□□ 0.27
TMEM249-201ENST00000561638 CT83Q5H943 113 aa16.76■□□□□ 0.27
TMEM249-201ENST00000561638 V9GYV3 84 aa16.76■□□□□ 0.27
TMEM249-201ENST00000561638 TCL1AP56279 114 aa16.75■□□□□ 0.27
TMEM249-201ENST00000561638 SMIM15Q7Z3B0 74 aa16.75■□□□□ 0.27
TMEM249-201ENST00000561638 C20orf202A1L168 122 aa16.74■□□□□ 0.27
TMEM249-201ENST00000561638 NOP10Q9NPE3 64 aaKnown RBP16.74■□□□□ 0.27
TMEM249-201ENST00000561638 A0A0J9YWU9 116 aa16.74■□□□□ 0.27
TMEM249-201ENST00000561638 NPSP0C0P6 89 aa16.74■□□□□ 0.27
TMEM249-201ENST00000561638 ARMS2P0C7Q2 107 aa16.74■□□□□ 0.27
TMEM249-201ENST00000561638 RNASE3P12724 160 aaKnown RBP16.74■□□□□ 0.27
TMEM249-201ENST00000561638 IL36BQ9NZH7 164 aa16.74■□□□□ 0.27
TMEM249-201ENST00000561638 PLAC8L1A1L4L8 177 aa16.73■□□□□ 0.27
TMEM249-201ENST00000561638 FER1L6-AS1Q8NA97 138 aa16.73■□□□□ 0.27
TMEM249-201ENST00000561638 C11orf68Q9H3H3 251 aaKnown RBP16.73■□□□□ 0.27
TMEM249-201ENST00000561638 PHLDA3Q9Y5J5 127 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms