RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	C7orf71	A4D174	169 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	APCS	P02743	223 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	S100A8	P05109	93 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	CDKN1B	P46527	198 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	CAMP	P49913	170 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	SNRPE	P62304	92 aa	Known RBP	5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	SLA	Q13239	276 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	ZNF124	Q15973	351 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	GFI1B	Q5VTD9	330 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	SSBP4	Q9BWG4	385 aa	Predicted RBP	5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	NAGK	Q9UJ70	344 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	HYDIN	Q4G0P3	5121 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	SORL1	Q92673	2214 aa		5.54	□□□□□ -1.52
TPM1-231	ENST00000561395	RBMY1B	A6NDE4	496 aa	Known RBP	5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	RBMY1E	A6NEQ0	496 aa	Known RBP	5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	OR11H12	B2RN74	326 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395		F2Z2F3	143 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395		M0R2Z0	102 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	UBE2C	O00762	179 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	SNAI2	O43623	268 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	ZNF324	O75467	553 aa	Predicted RBP	5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	OR5AL1	P0C617	328 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	RBMY1D	P0C7P1	496 aa	Known RBP	5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	NDUFA6	P56556	154 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	KRTAP10-11	P60412	298 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	SPINK13	Q1W4C9	94 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	ANXA2R	Q3ZCQ2	193 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	COA6	Q5JTJ3	125 aa	Known RBP	5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	DNLZ	Q5SXM8	178 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	SVIP	Q8NHG7	77 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	FAM110A	Q9BQ89	295 aa		5.53	□□□□□ -1.52
TPM1-231	ENST00000561395	TRAV12-2	A0A075B6T6	113 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	TRAV12-3	A0A0B4J271	114 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	MUC21	A0A0G2JKD1	596 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	MUC21	A0A140T8X8	626 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395		H3BVH4	76 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	MED14OS	P0DP75	135 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	HOXA5	P20719	270 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	ASIP	P42127	132 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	CMC4	P56277	68 aa	Predicted RBP	5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	KIAA1644	Q3SXP7	199 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	MUC21	Q5SSG8	566 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	ZNF493	Q6ZR52	646 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	WFDC9	Q8NEX5	89 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	MUC7	Q8TAX7	377 aa		5.52	□□□□□ -1.53
TPM1-231	ENST00000561395	IGHV4-4	A0A075B6R2	117 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	CRX	O43186	299 aa	Predicted RBP	5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	SRI	P30626	198 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	INSL3	P51460	131 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	CACNG7	P62955	275 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	TWIST1	Q15672	202 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	TDRG1	Q3Y452	100 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	C9orf66	Q5T8R8	295 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	FAM159A	Q6UWV7	190 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	TRPT1	Q86TN4	253 aa	Known RBP	5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	STH	Q8IWL8	128 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	HIST3H2BB	Q8N257	126 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	OR10AG1	Q8NH19	301 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	KCNS1	Q96KK3	526 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	SCRT2	Q9NQ03	307 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	C19orf73	Q9NVV2	129 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	PCLO	Q9Y6V0	5065 aa		5.51	□□□□□ -1.53
TPM1-231	ENST00000561395	IGHV1OR15-1	A0A075B7D0	117 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	IFITM10	A6NMD0	228 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	GNRH2	O43555	120 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	NXPH4	O95158	308 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	AMBP	P02760	352 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	CD7	P09564	240 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	RBMY1A1	P0DJD3	496 aa	Known RBP	5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	RBMY1C	P0DJD4	496 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	RNASE3	P12724	160 aa	Known RBP	5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	NTF3	P20783	257 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	S100A4	P26447	101 aa	Known RBP	5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	FXYD7	P58549	80 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	SST	P61278	116 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395		Q0VG73	95 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	RBMY1F	Q15415	496 aa	Known RBP	5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	OR10J3	Q5JRS4	329 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	FAM104B	Q5XKR9	115 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	TMEM191A	Q9H0A3	160 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	ZMAT4	Q9H898	229 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	TP53TG3	Q9ULZ0	132 aa		5.5	□□□□□ -1.53
TPM1-231	ENST00000561395	TRGV11	A0A075B6L2	103 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	IGHV3-16	A0A0C4DH30	117 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	INS	P01308	110 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	LINC00310	P59036	64 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	EGFEM1P	Q0D2K5	195 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	PDZD11	Q5EBL8	140 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	SPANXN1	Q5VSR9	72 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	AMN1	Q8IY45	258 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	TMEM256	Q8N2U0	113 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	C18orf32	Q8TCD1	76 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	C9orf85	Q96MD7	179 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	C20orf144	Q9BQM9	153 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	LINC00467	Q9BRT7	94 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	WFDC10A	Q9H1F0	79 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	MSRB1	Q9NZV6	116 aa		5.49	□□□□□ -1.53
TPM1-231	ENST00000561395	PHLDA3	Q9Y5J5	127 aa		5.49	□□□□□ -1.53

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