RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 C15orf40Q8WUR7 153 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 IL22RA2Q969J5 263 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 PACRGQ96M98 296 aaPredicted RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BLQ99880 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 TXNDC17Q9BRA2 123 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 MRPL32Q9BYC8 188 aaKnown RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 SLC25A22Q9H936 323 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 RPS10P5Q9NQ39 176 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HSPB7Q9UBY9 170 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 TRAV8-6A0A0B4J262 113 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 ZFP92A6NM28 416 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 PANO1I0J062 215 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 IGKV1-39P01597 117 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 IGKV1D-39P04432 117 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 FABP4P15090 132 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 S100GP29377 79 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 TAGLN2P37802 199 aaKnown RBP3.39□□□□□ -1.87
HERC1-213ENST00000561359 FGF8P55075 233 aaPredicted RBP3.39□□□□□ -1.87
HERC1-213ENST00000561359 TAS2R20P59543 309 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 UBE2G2P60604 165 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 RANP62826 216 aaKnown RBP3.39□□□□□ -1.87
HERC1-213ENST00000561359 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 LAGE3Q14657 143 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 IQCJQ1A5X6 159 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 BSXQ3C1V8 233 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 OR10J3Q5JRS4 329 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 GFI1BQ5VTD9 330 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 TMEM268Q5VZI3 342 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 DHRS11Q6UWP2 260 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 TMEM183AQ8IXX5 376 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 LYPD6BQ8NI32 183 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 ZNF471Q9BX82 626 aaPredicted RBP3.39□□□□□ -1.87
HERC1-213ENST00000561359 EHFQ9NZC4 300 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 GSKIPQ9P0R6 139 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 VAX2Q9UIW0 290 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 NAGKQ9UJ70 344 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 FLVCR2Q9UPI3 526 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 TMEM56-RWDD3S4R434 201 aa3.39□□□□□ -1.87
HERC1-213ENST00000561359 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 TRAV8-2A0A0B4J237 113 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 TRAV1-2A0A0B4J238 106 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 TRAV12-3A0A0B4J271 114 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 C5orf51A6NDU8 294 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 IFITM5A6NNB3 132 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 H0Y8G0 127 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 GOSR2O14653 212 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 CCL25O15444 150 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 ORM1P02763 201 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 FAUP35544 74 aaKnown RBP3.38□□□□□ -1.87
HERC1-213ENST00000561359 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
HERC1-213ENST00000561359 AKR1C2P52895 323 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 TAS2R19P59542 299 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 ZNF90Q03938 601 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 AKR1C1Q04828 323 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 MEF2DQ14814 521 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 HOGA1Q86XE5 327 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 NHLRC2Q8NBF2 726 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 OR5AP2Q8NGF4 316 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 ATP6V0E2Q8NHE4 81 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 VGLL1Q99990 258 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 VPS25Q9BRG1 176 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 PYGO2Q9BRQ0 406 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 MIEN1Q9BRT3 115 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 MRPL16Q9NX20 251 aaKnown RBP3.38□□□□□ -1.87
HERC1-213ENST00000561359 KLF12Q9Y4X4 402 aa3.38□□□□□ -1.87
HERC1-213ENST00000561359 A0A1B0GV72 72 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 SMIM30A4D0T7 59 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 F6UZH7 168 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 K7ERU9 68 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 SPINK4O60575 86 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 PITX3O75364 302 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 SCGNO76038 276 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 HRH1P35367 487 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 SULT1A2P50226 295 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 ZNF674Q2M3X9 581 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 C2orf83Q53S99 150 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 OCIAD2Q56VL3 154 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 UBE2NLQ5JXB2 153 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 STEAP1BQ6NZ63 245 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 REG3GQ6UW15 175 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 SH2D6Q7Z4S9 175 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 TBC1D26Q86UD7 250 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 INO80EQ8NBZ0 244 aaPredicted RBP3.37□□□□□ -1.87
HERC1-213ENST00000561359 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 ISOC2Q96AB3 205 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 RPUSD4Q96CM3 377 aaKnown RBP3.37□□□□□ -1.87
HERC1-213ENST00000561359 DPH3Q96FX2 82 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 TP53RKQ96S44 253 aa3.37□□□□□ -1.87
HERC1-213ENST00000561359 ARV1Q9H2C2 271 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms