RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GAGE4Q13068 117 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 GAGE5Q13069 117 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 ELOBQ15370 118 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 GAGE13Q4V321 117 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 NIT1Q86X76 327 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 A8MWV9 139 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 Q6ZRU5 148 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 LINC00479Q96M42 142 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 NDFIP1Q9BT67 221 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 PARLQ9H300 379 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 C11orf21Q9P2W6 132 aa12.01□□□□□ -0.49
TPM1-226ENST00000560959 TRAV6A0A075B6T7 132 aa12□□□□□ -0.49
TPM1-226ENST00000560959 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
TPM1-226ENST00000560959 LYRM1O43325 122 aa12□□□□□ -0.49
TPM1-226ENST00000560959 RNASE3P12724 160 aaKnown RBP12□□□□□ -0.49
TPM1-226ENST00000560959 KLK12Q9UKR0 248 aa12□□□□□ -0.49
TPM1-226ENST00000560959 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
TPM1-226ENST00000560959 CCDC160A6NGH7 325 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 Q0VG73 95 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 PQLC2Q6ZP29 291 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 DNAJC30Q96LL9 226 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 NUDT15Q9NV35 164 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 LRP2P98164 4655 aa11.99□□□□□ -0.49
TPM1-226ENST00000560959 TNXBP22105 4242 aa11.98□□□□□ -0.49
TPM1-226ENST00000560959 ZNF80P51504 273 aaPredicted RBP11.98□□□□□ -0.49
TPM1-226ENST00000560959 UFSP1Q6NVU6 142 aa11.98□□□□□ -0.49
TPM1-226ENST00000560959 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
TPM1-226ENST00000560959 SAMD10Q9BYL1 202 aa11.97□□□□□ -0.49
TPM1-226ENST00000560959 OR5AC2Q9NZP5 309 aa11.97□□□□□ -0.49
TPM1-226ENST00000560959 Q9UF83 564 aa11.97□□□□□ -0.49
TPM1-226ENST00000560959 A0A087WX48 190 aa11.96□□□□□ -0.49
TPM1-226ENST00000560959 H2AFB2P0C5Z0 115 aa11.96□□□□□ -0.49
TPM1-226ENST00000560959 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
TPM1-226ENST00000560959 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
TPM1-226ENST00000560959 GCGP01275 180 aa11.95□□□□□ -0.5
TPM1-226ENST00000560959 KCNIP4Q6PIL6 250 aa11.95□□□□□ -0.5
TPM1-226ENST00000560959 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
TPM1-226ENST00000560959 GNG5P63218 68 aa11.94□□□□□ -0.5
TPM1-226ENST00000560959 LGALSLQ3ZCW2 172 aaPredicted RBP11.94□□□□□ -0.5
TPM1-226ENST00000560959 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
TPM1-226ENST00000560959 C1orf43Q9BWL3 253 aa11.94□□□□□ -0.5
TPM1-226ENST00000560959 H0YIZ8 118 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 K7EQM0 130 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 C14orf178Q8N769 122 aaPredicted RBP11.93□□□□□ -0.5
TPM1-226ENST00000560959 C9orf163Q8N9P6 203 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 SCGB1C1Q8TD33 95 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 PSG8Q9UQ74 426 aa11.93□□□□□ -0.5
TPM1-226ENST00000560959 A0A0D9SG52 128 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 RHODO00212 210 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 TCRAP04437 139 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 CYCSP99999 105 aaKnown RBP11.92□□□□□ -0.5
TPM1-226ENST00000560959 ZFP69Q49AA0 526 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
TPM1-226ENST00000560959 S100A4P26447 101 aaKnown RBP11.91□□□□□ -0.5
TPM1-226ENST00000560959 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
TPM1-226ENST00000560959 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
TPM1-226ENST00000560959 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM1-226ENST00000560959 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
TPM1-226ENST00000560959 OR2G3Q8NGZ4 309 aa11.9□□□□□ -0.5
TPM1-226ENST00000560959 JPT2Q9H910 190 aa11.9□□□□□ -0.5
TPM1-226ENST00000560959 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
TPM1-226ENST00000560959 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
TPM1-226ENST00000560959 FLI1Q01543 452 aaPredicted RBP11.89□□□□□ -0.51
TPM1-226ENST00000560959 LRRC37A5PQ49AS3 106 aa11.89□□□□□ -0.51
TPM1-226ENST00000560959 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
TPM1-226ENST00000560959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
TPM1-226ENST00000560959 USP17L23D6RBM5 183 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 PRSS1P07477 247 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 ASIPP42127 132 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
TPM1-226ENST00000560959 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 ZC2HC1AQ96GY0 325 aa11.88□□□□□ -0.51
TPM1-226ENST00000560959 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
TPM1-226ENST00000560959 SIX6O95475 246 aa11.87□□□□□ -0.51
TPM1-226ENST00000560959 DNLZQ5SXM8 178 aa11.87□□□□□ -0.51
TPM1-226ENST00000560959 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
TPM1-226ENST00000560959 CRPP02741 224 aa11.86□□□□□ -0.51
TPM1-226ENST00000560959 CIRBPQ14011 172 aaKnown RBP11.86□□□□□ -0.51
TPM1-226ENST00000560959 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
TPM1-226ENST00000560959 EPDR1Q9UM22 224 aa11.86□□□□□ -0.51
TPM1-226ENST00000560959 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
TPM1-226ENST00000560959 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
TPM1-226ENST00000560959 UBE2D3P61077 147 aa11.85□□□□□ -0.51
TPM1-226ENST00000560959 UBE2D2P62837 147 aa11.85□□□□□ -0.51
TPM1-226ENST00000560959 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
TPM1-226ENST00000560959 MIAQ16674 131 aa11.85□□□□□ -0.51
TPM1-226ENST00000560959 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
TPM1-226ENST00000560959 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 PANO1I0J062 215 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
TPM1-226ENST00000560959 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms