RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SLC25A16P16260 332 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 FAM208BQ5VWN6 2430 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 HSD52Q0P140 79 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 MUC4Q99102 2169 aa10.94□□□□□ -0.66
CRTC3-210ENST00000560927 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
CRTC3-210ENST00000560927 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
CRTC3-210ENST00000560927 MED14OSP0DP75 135 aa10.94□□□□□ -0.66
CRTC3-210ENST00000560927 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
CRTC3-210ENST00000560927 DOPEY2Q9Y3R5 2298 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 ZNF688P0C7X2 276 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 RNASE8Q8TDE3 154 aaKnown RBP10.93□□□□□ -0.66
CRTC3-210ENST00000560927 USP24Q9UPU5 2620 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 LRRK2Q5S007 2527 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 A0A087WX48 190 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 ID1P41134 155 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 JPT2Q9H910 190 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 CBY1Q9Y3M2 126 aa10.93□□□□□ -0.66
CRTC3-210ENST00000560927 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.92□□□□□ -0.66
CRTC3-210ENST00000560927 PSMG4Q5JS54 123 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 MXRA5Q9NR99 2828 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 LINC00315P59091 139 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 NAA38Q9BRA0 125 aaKnown RBP10.92□□□□□ -0.66
CRTC3-210ENST00000560927 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
CRTC3-210ENST00000560927 A6NDN8 102 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 K7EP13 123 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 NXPH4O95158 308 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 SYNJ2BPP57105 145 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 JMJD8Q96S16 334 aa10.91□□□□□ -0.66
CRTC3-210ENST00000560927 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
CRTC3-210ENST00000560927 CD7P09564 240 aa10.9□□□□□ -0.66
CRTC3-210ENST00000560927 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
CRTC3-210ENST00000560927 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
CRTC3-210ENST00000560927 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
CRTC3-210ENST00000560927 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.67
CRTC3-210ENST00000560927 H3BRM9 83 aa10.9□□□□□ -0.67
CRTC3-210ENST00000560927 MAPKAPK5-AS1Q8N8E1 139 aa10.9□□□□□ -0.67
CRTC3-210ENST00000560927 RAB37Q96AX2 223 aa10.9□□□□□ -0.67
CRTC3-210ENST00000560927 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 A0A087WW49 117 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 A0A087WWL8 130 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 J3QLI3 93 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 CHAC1Q9BUX1 264 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 PTPN13Q12923 2485 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 KRTAP10-9P60411 292 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 POM121L12Q8N7R1 296 aa10.89□□□□□ -0.67
CRTC3-210ENST00000560927 A0A0J9YX75 114 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 H3BUT2 72 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 COX6B1P14854 86 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 FXYD2P54710 66 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 AGRNO00468 2067 aa10.88□□□□□ -0.67
CRTC3-210ENST00000560927 TRAV12-1A0A0B4J245 112 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 F8VRH5 84 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 H7C1H1 209 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 K7EQG2 157 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 GCSHP23434 173 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 PLNP26678 52 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 ZNF702PQ9H963 129 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
CRTC3-210ENST00000560927 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
CRTC3-210ENST00000560927 ABCA12Q86UK0 2595 aa10.87□□□□□ -0.67
CRTC3-210ENST00000560927 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
CRTC3-210ENST00000560927 FSHBP01225 129 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 LGALS1P09382 135 aaKnown RBP10.86□□□□□ -0.67
CRTC3-210ENST00000560927 IGHV4-31P0DP07 118 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
CRTC3-210ENST00000560927 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 Q6YL49 198 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
CRTC3-210ENST00000560927 SORL1Q92673 2214 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 K7EMI3 77 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 HOXD3P31249 432 aaPredicted RBP10.86□□□□□ -0.67
CRTC3-210ENST00000560927 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
CRTC3-210ENST00000560927 IGHV3-16A0A0C4DH30 117 aa10.85□□□□□ -0.67
CRTC3-210ENST00000560927 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
CRTC3-210ENST00000560927 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
CRTC3-210ENST00000560927 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
CRTC3-210ENST00000560927 F5H697 171 aa10.84□□□□□ -0.67
CRTC3-210ENST00000560927 DUSP14O95147 198 aaKnown RBP10.84□□□□□ -0.67
CRTC3-210ENST00000560927 PPP1R17O96001 155 aa10.84□□□□□ -0.67
CRTC3-210ENST00000560927 RBX1P62877 108 aa10.84□□□□□ -0.67
CRTC3-210ENST00000560927 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms