RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SH3BGRL3Q9H299 93 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 OR51M1Q9H341 326 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 AAMDCQ9H7C9 122 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 MRPL16Q9NX20 251 aaKnown RBP6.23□□□□□ -1.41
HERC1-210ENST00000560897 RPH3ALQ9UNE2 315 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 TRAV8-3A0A0A6YYJ7 113 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 H3BRN7 92 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 CXorf1O96002 111 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 IFNA7P01567 189 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 TCL1AP56279 114 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 RAB14P61106 215 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 GCSAMLQ5JQS6 135 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 PQLC2Q6ZP29 291 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 MIR17HGQ75NE6 70 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 EIF4E3Q8N5X7 224 aaKnown RBP6.22□□□□□ -1.41
HERC1-210ENST00000560897 C11orf72Q8NBR9 251 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 SFT2D1Q8WV19 159 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 BAALCQ8WXS3 180 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 PHYHIPLQ96FC7 376 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 KLF12Q9Y4X4 402 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 COX11Q9Y6N1 276 aa6.22□□□□□ -1.41
HERC1-210ENST00000560897 CTXND1A0A1B0GTU2 59 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 HMGB3O15347 200 aaKnown RBP6.21□□□□□ -1.42
HERC1-210ENST00000560897 NBEAP1P0C6P0 100 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 HIST1H1EP10412 219 aaKnown RBP6.21□□□□□ -1.42
HERC1-210ENST00000560897 MALP21145 153 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 CSN1S1P47710 185 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 UBE2L3P68036 154 aaKnown RBP6.21□□□□□ -1.42
HERC1-210ENST00000560897 BLOC1S1P78537 153 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 CLLU1Q5K131 121 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 LCN15Q6UWW0 184 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 CMTM2Q8TAZ6 248 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
HERC1-210ENST00000560897 SNRPCP09234 159 aaKnown RBP6.2□□□□□ -1.42
HERC1-210ENST00000560897 OR10J4P0C629 311 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 TIRAPP58753 221 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 RANP62826 216 aaKnown RBP6.2□□□□□ -1.42
HERC1-210ENST00000560897 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 TEX261Q6UWH6 196 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 ALKAL2Q6UX46 152 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 RMI2Q96E14 147 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 LPAP08519 4548 aa6.2□□□□□ -1.42
HERC1-210ENST00000560897 A0A087X0K7 114 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 A0A1B0GV50 99 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 C7orf71A4D174 169 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 IFNA1P01562 189 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 SLC25A5P05141 298 aaKnown RBP6.19□□□□□ -1.42
HERC1-210ENST00000560897 IBA57Q5T440 356 aaKnown RBP6.19□□□□□ -1.42
HERC1-210ENST00000560897 ODF3Q96PU9 254 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 SLC25A2Q9BXI2 301 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
HERC1-210ENST00000560897 TRAV8-1A0A0A6YYK1 113 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 F6UZH7 168 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 H3BTX0 84 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 K7EQM0 130 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 SFTA3P0C7M3 94 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 STAG3L2P0CL84 134 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 STAG3L3P0CL85 134 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 ARL14EPLP0DKL9 152 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 PYYP10082 97 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 GCHFRP30047 84 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 SULT1A2P50226 295 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 PDE6HQ13956 83 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 LINC01600Q96MT4 127 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 NKX6-2Q9C056 277 aaPredicted RBP6.18□□□□□ -1.42
HERC1-210ENST00000560897 PRELID1Q9Y255 219 aa6.18□□□□□ -1.42
HERC1-210ENST00000560897 TRBV19A0A075B6N1 114 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 PGPA6NDG6 321 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 GGTLC3B5MD39 225 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 ZNF253O75346 499 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERC1-210ENST00000560897 FGF8P55075 233 aaPredicted RBP6.17□□□□□ -1.42
HERC1-210ENST00000560897 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 ZNF479Q96JC4 524 aa6.17□□□□□ -1.42
HERC1-210ENST00000560897 H3BQ15 152 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 PFN1P07737 140 aaKnown RBP6.16□□□□□ -1.42
HERC1-210ENST00000560897 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 IGLC2P0DOY2 106 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 FHITP49789 147 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 UBE2G2P60604 165 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 SUN5Q8TC36 379 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 MBD3L1Q8WWY6 194 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 SAT2Q96F10 170 aaPredicted RBP6.16□□□□□ -1.42
HERC1-210ENST00000560897 FAM167A-AS1Q96KT0 104 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
HERC1-210ENST00000560897 ZNF331Q9NQX6 463 aaPredicted RBP6.16□□□□□ -1.42
HERC1-210ENST00000560897 OTORQ9NRC9 128 aa6.16□□□□□ -1.42
HERC1-210ENST00000560897 MUC2Q02817 5179 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 LOC100131303A0A0U1RQF7 123 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms