RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 NUTF2P61970 127 aaKnown RBP8.2□□□□□ -1.1
SNX1-212ENST00000560861 CACNG7P62955 275 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 SLAQ13239 276 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 TMEM256Q8N2U0 113 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 MDFICQ9P1T7 246 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 TRGV11A0A075B6L2 103 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 SPRY2O43597 315 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 S100A8P05109 93 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 TRGC1P0CF51 173 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 NTF3P20783 257 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 RAB5BP61020 215 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
SNX1-212ENST00000560861 ZNF705AQ6ZN79 300 aaPredicted RBP8.19□□□□□ -1.1
SNX1-212ENST00000560861 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 IL17DQ8TAD2 202 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 BORCS7Q96B45 105 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
SNX1-212ENST00000560861 KIR2DL5BA0A0G2JN68 375 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 KIR2DL5BA0A0G2JPC4 375 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 G3V4G9 280 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 PRM2P04554 102 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 KIR2DL5AQ8N109 375 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 ZFP82Q8N141 532 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 LINC01587Q99440 93 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 C1QTNF4Q9BXJ3 329 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 TMEM191AQ9H0A3 160 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 CSTL1Q9H114 145 aa8.18□□□□□ -1.1
SNX1-212ENST00000560861 NACAE9PAV3 2078 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 LOC102724200A0A096LPH7 203 aaPredicted RBP8.17□□□□□ -1.1
SNX1-212ENST00000560861 CBY3A6NI87 242 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 A8MZ25 164 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 APCSP02743 223 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
SNX1-212ENST00000560861 RAB4BP61018 213 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 FAM104BQ5XKR9 115 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 PTH2Q96A98 100 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 RNF185Q96GF1 192 aa8.17□□□□□ -1.1
SNX1-212ENST00000560861 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 AZU1P20160 251 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 LINC00315P59091 139 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 TWIST1Q15672 202 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
SNX1-212ENST00000560861 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
SNX1-212ENST00000560861 ZMAT5Q9UDW3 170 aaKnown RBP8.16□□□□□ -1.1
SNX1-212ENST00000560861 GOLT1BQ9Y3E0 138 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 KIF25-AS1Q9Y6Z4 181 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 U3KQK5 164 aa8.16□□□□□ -1.1
SNX1-212ENST00000560861 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 EVI2AP22794 236 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 ZNF415Q09FC8 603 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
SNX1-212ENST00000560861 SPANXN1Q5VSR9 72 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 POM121L12Q8N7R1 296 aa8.15□□□□□ -1.1
SNX1-212ENST00000560861 ALKBH7Q9BT30 221 aaPredicted RBP8.15□□□□□ -1.1
SNX1-212ENST00000560861 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.1
SNX1-212ENST00000560861 M0R381 172 aa8.14□□□□□ -1.11
SNX1-212ENST00000560861 RAB4AP20338 218 aa8.14□□□□□ -1.11
SNX1-212ENST00000560861 SSTP61278 116 aa8.14□□□□□ -1.11
SNX1-212ENST00000560861 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
SNX1-212ENST00000560861 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
SNX1-212ENST00000560861 GSN-AS1Q9NRJ2 163 aa8.14□□□□□ -1.11
SNX1-212ENST00000560861 SRIP30626 198 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 APOC4P55056 127 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 LINC00310P59036 64 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 Q0VG73 95 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 TMEM263Q8WUH6 116 aaKnown RBP8.13□□□□□ -1.11
SNX1-212ENST00000560861 SPXQ9BT56 116 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 TMEM208Q9BTX3 173 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 JPT2Q9H910 190 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 X6R8D5 127 aa8.13□□□□□ -1.11
SNX1-212ENST00000560861 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 NBEAL2Q6ZNJ1 2754 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 IGHV3OR16-12A0A075B7B8 117 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 M0R2P5 195 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 UBE2CO00762 179 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 CRYGDP07320 174 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 HTN1P15515 57 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
SNX1-212ENST00000560861 GAS8-AS1O95177 125 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 DAZ2Q13117 558 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms