RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	HIST1H2BB	P33778	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	RNASE4	P34096	147 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST1H2BD	P58876	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST1H2BC	P62807	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HBB	P68871	147 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	RIG	Q13278	110 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST2H2BE	Q16778	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	DNLZ	Q5SXM8	178 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	LYZL1	Q6UWQ5	148 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731		Q6ZQT7	251 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	WFDC9	Q8NEX5	89 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST1H2BH	Q93079	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST1H2BN	Q99877	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	HIST1H2BM	Q99879	126 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	FAM110A	Q9BQ89	295 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	CNFN	Q9BYD5	112 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	MAP6D1	Q9H9H5	199 aa		5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	NIPBL	Q6KC79	2804 aa	eCLIP	5.68	□□□□□ -1.5
MARK3-222	ENST00000560731	TEP1	Q99973	2627 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	TMSB15B	A0A087X1C1	80 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	KNCN	A6PVL3	124 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	SNURFL	B1AK76	121 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	ARMS2	P0C7Q2	107 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	CTRL	P40313	264 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	INSL3	P51460	131 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	KRTAP24-1	Q3LI83	254 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	ODF3L2	Q3SX64	289 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	COA6	Q5JTJ3	125 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	FER1L6-AS1	Q8NA97	138 aa		5.67	□□□□□ -1.5
MARK3-222	ENST00000560731	ATR	Q13535	2644 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	IGHV4-4	A0A075B6R2	117 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	C7orf71	A4D174	169 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	GRIFIN	A4D1Z8	144 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	GAGE10	A6NGK3	116 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	SNAI2	O43623	268 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	APCS	P02743	223 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	S100A8	P05109	93 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	S100A6	P06703	90 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	OR5AL1	P0C617	328 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	CDKN1B	P46527	198 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	CAMP	P49913	170 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	NDUFA6	P56556	154 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	SNRPE	P62304	92 aa	Known RBP	5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	TDRG1	Q3Y452	100 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	ZNF493	Q6ZR52	646 aa		5.66	□□□□□ -1.5
MARK3-222	ENST00000560731	RBMY1B	A6NDE4	496 aa	Known RBP	5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	RBMY1E	A6NEQ0	496 aa	Known RBP	5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	OR11H12	B2RN74	326 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	CRX	O43186	299 aa	Predicted RBP	5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	GNRH2	O43555	120 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	NUDT3	O95989	172 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	IGKV3-20	P01619	116 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	RBMY1D	P0C7P1	496 aa	Known RBP	5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	RAB4B	P61018	213 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	C9orf66	Q5T8R8	295 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	GFI1B	Q5VTD9	330 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	PRIMA1	Q86XR5	153 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	BORCS7	Q96B45	105 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	KCNS1	Q96KK3	526 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	SCRT2	Q9NQ03	307 aa		5.65	□□□□□ -1.5
MARK3-222	ENST00000560731	CUBN	O60494	3623 aa		5.65	□□□□□ -1.51
MARK3-222	ENST00000560731	AGRN	O00468	2067 aa		5.65	□□□□□ -1.51
MARK3-222	ENST00000560731	TENM1	Q9UKZ4	2725 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	TRAV12-3	A0A0B4J271	114 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731		M0R2Z0	102 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	UBE2C	O00762	179 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	AMBP	P02760	352 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	CD7	P09564	240 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	NTF3	P20783	257 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	ASIP	P42127	132 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	CACNG7	P62955	275 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731		Q0VG73	95 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	SLA	Q13239	276 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	SPINK13	Q1W4C9	94 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	KIAA1644	Q3SXP7	199 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	FAM159A	Q6UWV7	190 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	TRPT1	Q86TN4	253 aa	Known RBP	5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	LINC00467	Q9BRT7	94 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	TPPP3	Q9BW30	176 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	MAST4	O15021	2626 aa		5.64	□□□□□ -1.51
MARK3-222	ENST00000560731	TRAV12-2	A0A075B6T6	113 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	IGHV1OR15-1	A0A075B7D0	117 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	RNASE3	P12724	160 aa	Known RBP	5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	TWIST1	Q15672	202 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	MUC21	Q5SSG8	566 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	FAM104B	Q5XKR9	115 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	SPATA3	Q8NHX4	192 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	C20orf144	Q9BQM9	153 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	MCRIP2	Q9BUT9	160 aa	Known RBP	5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	TMEM191A	Q9H0A3	160 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	TP53TG3	Q9ULZ0	132 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731		U3KQK5	164 aa		5.63	□□□□□ -1.51
MARK3-222	ENST00000560731	IGHV3-16	A0A0C4DH30	117 aa		5.62	□□□□□ -1.51
MARK3-222	ENST00000560731	MUC21	A0A0G2JKD1	596 aa		5.62	□□□□□ -1.51
MARK3-222	ENST00000560731	MUC21	A0A140T8X8	626 aa		5.62	□□□□□ -1.51
MARK3-222	ENST00000560731	S100A4	P26447	101 aa	Known RBP	5.62	□□□□□ -1.51
MARK3-222	ENST00000560731	FXYD7	P58549	80 aa		5.62	□□□□□ -1.51

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