RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GTSF1LQ9H1H1 148 aa6.63□□□□□ -1.35
CCDC33-209ENST00000560565 DKK2Q9UBU2 259 aa6.63□□□□□ -1.35
CCDC33-209ENST00000560565 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 H3BTX0 84 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 IGHV4-31P0DP07 118 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 UTF1Q5T230 341 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 TPSG1Q9NRR2 321 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 TMEM160Q9NX00 188 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 DPM3Q9P2X0 92 aa6.62□□□□□ -1.35
CCDC33-209ENST00000560565 IGLV11-55A0A075B6I3 123 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 CRLF1O75462 422 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 EGR2P11161 476 aaPredicted RBP6.61□□□□□ -1.35
CCDC33-209ENST00000560565 PRTN3P24158 256 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 ASIPP42127 132 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 LMO4P61968 165 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
CCDC33-209ENST00000560565 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 FBXL15Q9H469 300 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 PLXNB1O43157 2135 aa6.61□□□□□ -1.35
CCDC33-209ENST00000560565 TMSB15BA0A087X1C1 80 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 TRBV7-9A0A0J9YWB2 115 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 TGFAP01135 160 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 FOXI1Q12951 378 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 MINOS1Q5TGZ0 78 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 SPANXN1Q5VSR9 72 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 GTSCR1Q86UQ5 136 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 GLMPQ8WWB7 406 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 TP73-AS1Q9UF72 201 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 MINOS1-NBL1R4GNA1 71 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
CCDC33-209ENST00000560565 TRBV7-3A0A075B6L6 115 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 TRAV40A0A0B4J280 105 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 A8MWV9 139 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 LY6LH3BQJ8 138 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 M0R3E3 92 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 FAM106CPP0CH98 169 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 CRYBA4P53673 196 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 SRSF9Q13242 221 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC33-209ENST00000560565 KLK9Q2XQG4 91 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 ETDBQ3ZM63 59 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 FAM106AQ4KMX7 169 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 LINC01356Q8N9X3 169 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
CCDC33-209ENST00000560565 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.35
CCDC33-209ENST00000560565 MRPL35Q9NZE8 188 aaKnown RBP6.59□□□□□ -1.35
CCDC33-209ENST00000560565 ZNRD1Q9P1U0 126 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 ONECUT1Q9UBC0 465 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 KLK9Q9UKQ9 250 aa6.59□□□□□ -1.35
CCDC33-209ENST00000560565 IGLV2-18A0A075B6J9 118 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 IGHV3-21A0A0B4J1V1 117 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 IGHV3-72A0A0B4J1Y9 119 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 CENPVL3A0A0U1RRI6 287 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 B4DSR2 109 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 GATA3P23771 443 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 TEN1Q86WV5 123 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 METTL26Q96S19 204 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 DPH3P1Q9H4G8 78 aa6.58□□□□□ -1.36
CCDC33-209ENST00000560565 IGKV2-40A0A087WW87 121 aaPredicted RBP6.57□□□□□ -1.36
CCDC33-209ENST00000560565 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
CCDC33-209ENST00000560565 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 TIMM23O14925 209 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 IGKV2D-40P01614 121 aaPredicted RBP6.57□□□□□ -1.36
CCDC33-209ENST00000560565 ZFP36P26651 326 aaKnown RBP6.57□□□□□ -1.36
CCDC33-209ENST00000560565 DIAPH2-AS1Q14236 149 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 WFDC2Q14508 124 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 C9orf47Q6ZRZ4 202 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 C9orf139Q6ZV77 190 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 LINC00477Q96M19 166 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 C17orf77Q96MU5 243 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 NAA38Q9BRA0 125 aaKnown RBP6.57□□□□□ -1.36
CCDC33-209ENST00000560565 SIRPDQ9H106 197 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
CCDC33-209ENST00000560565 IGKV2D-26A0A0A0MRZ7 120 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 TRBV7-1A0A0A6YYK4 115 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 TRAV21A0A0B4J279 112 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 ZNF815PA8K554 130 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 SMKR1H3BMG3 65 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 K7ERJ3 54 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 OVOL1O14753 267 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 MSMBP08118 114 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 SPINK8P0C7L1 97 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 SCGB1C2P0DMR2 95 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 HLA-DMBP28068 263 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 UBE2E1P51965 193 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms