RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GAGE12IP0CL82 117 aa10.25□□□□□ -0.77
SMAD6-204ENST00000559931 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
SMAD6-204ENST00000559931 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
SMAD6-204ENST00000559931 SSTP61278 116 aa10.25□□□□□ -0.77
SMAD6-204ENST00000559931 MRPL16Q9NX20 251 aaKnown RBP10.25□□□□□ -0.77
SMAD6-204ENST00000559931 IL36BQ9NZH7 164 aa10.25□□□□□ -0.77
SMAD6-204ENST00000559931 PHLDA3Q9Y5J5 127 aa10.25□□□□□ -0.77
SMAD6-204ENST00000559931 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
SMAD6-204ENST00000559931 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 Q6ZTI0 123 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 C9orf85Q96MD7 179 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 EDA2RQ9HAV5 297 aa10.24□□□□□ -0.77
SMAD6-204ENST00000559931 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 SPINK4O60575 86 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 MT-ND4LP03901 98 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 CXCL1P09341 107 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 LGALS9BQ3B8N2 356 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 IL17DQ8TAD2 202 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 MUC4Q99102 2169 aa10.23□□□□□ -0.77
SMAD6-204ENST00000559931 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 M0R381 172 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 PPP1R2P9O14990 202 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 C12orf74Q32Q52 190 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 V9GYV3 84 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
SMAD6-204ENST00000559931 F2Z2F3 143 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 MED14OSP0DP75 135 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 HTN3P15516 51 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 RNF212Q495C1 297 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 CT83Q5H943 113 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 ATRAIDQ6UW56 229 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 TSKUQ8WUA8 353 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 RASL10AQ92737 203 aa10.21□□□□□ -0.77
SMAD6-204ENST00000559931 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 ZFP82Q8N141 532 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 BORCS7Q96B45 105 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 ANAPC16Q96DE5 110 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 PGLYRP4Q96LB8 373 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 SCRT2Q9NQ03 307 aa10.2□□□□□ -0.78
SMAD6-204ENST00000559931 SNAI2O43623 268 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 IGLC6P0CF74 106 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 CACNG7P62955 275 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 Q6ZTC4 211 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 CLRN3Q8NCR9 226 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 OR10AG1Q8NH19 301 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 SSBP4Q9BWG4 385 aaPredicted RBP10.19□□□□□ -0.78
SMAD6-204ENST00000559931 GFRA4Q9GZZ7 299 aa10.19□□□□□ -0.78
SMAD6-204ENST00000559931 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
SMAD6-204ENST00000559931 ATP5G1P05496 136 aa10.18□□□□□ -0.78
SMAD6-204ENST00000559931 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
SMAD6-204ENST00000559931 PTH2Q96A98 100 aa10.18□□□□□ -0.78
SMAD6-204ENST00000559931 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
SMAD6-204ENST00000559931 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 F5H768 121 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 TWIST1Q15672 202 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 RPS10P5Q9NQ39 176 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
SMAD6-204ENST00000559931 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 C7orf77A4D0Y5 90 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 A8MWV9 139 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 NTF3P20783 257 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 CTRLP40313 264 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
SMAD6-204ENST00000559931 RHEBQ15382 184 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
SMAD6-204ENST00000559931 NDUFAF3Q9BU61 184 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 JPT2Q9H910 190 aa10.16□□□□□ -0.78
SMAD6-204ENST00000559931 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 TRGV4A0A0C4DH28 118 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 SMIM27A0A1W2PRY6 76 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 RS1O15537 224 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 ZNF479Q96JC4 524 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.78
SMAD6-204ENST00000559931 A0A087WWL8 130 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 LOC105371267A0A1B0GV96 52 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms