RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.21
TPM1-221ENST00000559831 C9orf85Q96MD7 179 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 SMCO4Q9NRQ5 59 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 TP53TG1Q9Y2A0 90 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 PHLDA3Q9Y5J5 127 aa7.52□□□□□ -1.21
TPM1-221ENST00000559831 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 F2Z2F3 143 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 M0R381 172 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 DEFB4AO15263 64 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 SNAI2O43623 268 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 OR5AL1P0C617 328 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 MIFP14174 115 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 CTRLP40313 264 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 SPANXN1Q5VSR9 72 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
TPM1-221ENST00000559831 OR10AG1Q8NH19 301 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 B9D2Q9BPU9 175 aa7.51□□□□□ -1.21
TPM1-221ENST00000559831 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
TPM1-221ENST00000559831 CACNG7P62955 275 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
TPM1-221ENST00000559831 Q8NAQ8 132 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 SYT8Q8NBV8 401 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 TM2D3Q9BRN9 247 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 SPXQ9BT56 116 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 SSBP4Q9BWG4 385 aaPredicted RBP7.5□□□□□ -1.21
TPM1-221ENST00000559831 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 NOP10Q9NPE3 64 aaKnown RBP7.5□□□□□ -1.21
TPM1-221ENST00000559831 SCRT2Q9NQ03 307 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
TPM1-221ENST00000559831 FBN3Q75N90 2809 aa7.5□□□□□ -1.21
TPM1-221ENST00000559831 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 A0A1B0GUT8 65 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 PLAC8L1A1L4L8 177 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 M0R2P5 195 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 RIGQ13278 110 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 ELOBQ15370 118 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 TWIST1Q15672 202 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 IL17DQ8TAD2 202 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
TPM1-221ENST00000559831 TRAV9-1A0A075B6T8 112 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 NTF3P20783 257 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 CAMPP49913 170 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 MSRB1Q9NZV6 116 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
TPM1-221ENST00000559831 GAGE12BA1L429 117 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 GAGE7O76087 117 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 GAGE12FP0CL80 117 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 GAGE12GP0CL81 117 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 GAGE12IP0CL82 117 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 RAB4BP61018 213 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 DAZ2Q13117 558 aaKnown RBP7.47□□□□□ -1.21
TPM1-221ENST00000559831 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 WDR73Q6P4I2 378 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 Q6ZTI0 123 aa7.47□□□□□ -1.21
TPM1-221ENST00000559831 A0A0J9YWU9 116 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 NXPH4O95158 308 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 TRGC1P0CF51 173 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 DEFB130BP0DP73 79 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 DEFB130AP0DP74 79 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 HBBP68871 147 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.46□□□□□ -1.22
TPM1-221ENST00000559831 FAM210BQ96KR6 192 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 AP1S3Q96PC3 154 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 JPT2Q9H910 190 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 CELA1Q9UNI1 258 aa7.46□□□□□ -1.22
TPM1-221ENST00000559831 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 TRGV2A0A075B6R0 118 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 IGHV4-4A0A075B6R2 117 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 A0A1B0GW15 77 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 LYRM9A8MSI8 78 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 S100A8P05109 93 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 SMIM17P0DL12 118 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 FAM74A4Q5TZK3 123 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 SMIM15Q7Z3B0 74 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 PTH2Q96A98 100 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 C11orf68Q9H3H3 251 aaKnown RBP7.45□□□□□ -1.22
TPM1-221ENST00000559831 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
TPM1-221ENST00000559831 A0A087WWL8 130 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 MGPP08493 103 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
TPM1-221ENST00000559831 SPART-AS1P0CW21 52 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 EVI2AP22794 236 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 DAD1P61803 113 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
TPM1-221ENST00000559831 RASL10AQ92737 203 aa7.44□□□□□ -1.22
TPM1-221ENST00000559831 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 TEX48A0A1B0GUV7 120 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms