RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 PEA15Q15121 130 aa6.37□□□□□ -1.39
HMG20A-209ENST00000559728 PRR27Q6MZM9 219 aa6.37□□□□□ -1.39
HMG20A-209ENST00000559728 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
HMG20A-209ENST00000559728 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
HMG20A-209ENST00000559728 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
HMG20A-209ENST00000559728 LY96Q9Y6Y9 160 aa6.37□□□□□ -1.39
HMG20A-209ENST00000559728 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 LINC00862A6NCI5 91 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 ZNF727A8MUV8 499 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 SNURFLB1AK76 121 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 CXCL1P09341 107 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 MGST1P10620 155 aaKnown RBP6.36□□□□□ -1.39
HMG20A-209ENST00000559728 HOXA5P20719 270 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 DAD1P61803 113 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 LGALS9BQ3B8N2 356 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 PTH2Q96A98 100 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 LYSTQ99698 3801 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 SMIM7Q9BQ49 75 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 SPXQ9BT56 116 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 RNASE7Q9H1E1 156 aaKnown RBP6.36□□□□□ -1.39
HMG20A-209ENST00000559728 IL36BQ9NZH7 164 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
HMG20A-209ENST00000559728 TRGV1A0A0A0MS02 117 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 M0R2P5 195 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 SNAI2O43623 268 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 ARMS2P0C7Q2 107 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 GZMBP10144 247 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 ADCYAP1P18509 176 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 ASIPP42127 132 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 RPL23P62829 140 aaKnown RBP6.35□□□□□ -1.39
HMG20A-209ENST00000559728 FAM231DQ6ZW35 169 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
HMG20A-209ENST00000559728 DEFB131BA0A096LNP1 70 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 H3BVH4 76 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 NXPH4O95158 308 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 TMEM241Q24JQ0 296 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 FAM74A3Q4VXF1 159 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 OR2D3Q8NGH3 330 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 GTSF1Q8WW33 167 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 ISOC2Q96AB3 205 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 JPT2Q9H910 190 aa6.34□□□□□ -1.39
HMG20A-209ENST00000559728 P01737 135 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 ATP5G1P05496 136 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 FHL2Q14192 279 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 ZNF876PQ49A33 203 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 ANKRD39Q53RE8 183 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 SOHLH1Q5JUK2 328 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 UQCC3Q6UW78 93 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 COMMD7Q86VX2 200 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 OR10AG1Q8NH19 301 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 RPP21Q9H633 154 aaKnown RBP6.33□□□□□ -1.4
HMG20A-209ENST00000559728 NAT8Q9UHE5 227 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
HMG20A-209ENST00000559728 TRGV2A0A075B6R0 118 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 MUC21A0A0G2JKD1 596 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 MUC21A0A140T8X8 626 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 TMEM218A2RU14 115 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 RS1O15537 224 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 HTN3P15516 51 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
HMG20A-209ENST00000559728 PIK3CD-AS1Q5SR53 167 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 CFAP126Q5VTH2 177 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 SAMD10Q9BYL1 202 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 BIN3Q9NQY0 253 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 OSTCQ9NRP0 149 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 V9GYV3 84 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
HMG20A-209ENST00000559728 IGHV4-4A0A075B6R2 117 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 F5H768 121 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 CRYGDP07320 174 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 CTRLP40313 264 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 FOXA3P55318 350 aaPredicted RBP6.31□□□□□ -1.4
HMG20A-209ENST00000559728 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
HMG20A-209ENST00000559728 CT83Q5H943 113 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 Q6ZSN1 163 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
HMG20A-209ENST00000559728 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 MSRB1Q9NZV6 116 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 KIF25-AS1Q9Y6Z4 181 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 MUC4Q99102 2169 aa6.31□□□□□ -1.4
HMG20A-209ENST00000559728 IGLL5B9A064 214 aa6.3□□□□□ -1.4
HMG20A-209ENST00000559728 GATCO43716 136 aaKnown RBP6.3□□□□□ -1.4
HMG20A-209ENST00000559728 LINC00315P59091 139 aa6.3□□□□□ -1.4
HMG20A-209ENST00000559728 ERVFC1-1P60608 527 aa6.3□□□□□ -1.4
HMG20A-209ENST00000559728 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms