RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 M0R1W7 72 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 SEM1Q6ZVN7 128 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
USP3-210ENST00000559192 PRAC2D3DTV9 90 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 PFN2P35080 140 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
USP3-210ENST00000559192 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
USP3-210ENST00000559192 LINC00477Q96M19 166 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 J3QQQ9 107 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 CRYGBP07316 175 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 ODF1Q14990 250 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 Q6ZUT4 128 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 AGPAT4-IT1Q9H0P7 198 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 F5H768 121 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 CGB3P0DN86 165 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 CGB7P0DN87 165 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 SAA4P35542 130 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 FAM110DQ8TAY7 271 aaPredicted RBP5.54□□□□□ -1.52
USP3-210ENST00000559192 SPRY4Q9C004 299 aa5.54□□□□□ -1.52
USP3-210ENST00000559192 TRIOBPQ9H2D6 2365 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 GNRH2O43555 120 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 MT-ATP8P03928 68 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 ZNF80P51504 273 aaPredicted RBP5.53□□□□□ -1.52
USP3-210ENST00000559192 MINOS1Q5TGZ0 78 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 KLHL30-AS1Q8NEE0 82 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 CCL19Q99731 98 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 MINOS1-NBL1R4GNA1 71 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 ZDBF2Q9HCK1 2354 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 SPTBN1Q01082 2364 aaKnown RBP5.53□□□□□ -1.52
USP3-210ENST00000559192 WI2-2373I1.2A0A1W2PRP0 233 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 RHODO00212 210 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 C20orf78Q9BR46 151 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 KLK9Q9UKQ9 250 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 EXPH5Q8NEV8 1989 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 ATP5G1P05496 136 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 MYCNOSP40205 109 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 LINC01620Q4KN68 170 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 ZNF493Q6ZR52 646 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 Q71RC1 249 aaPredicted RBP5.53□□□□□ -1.52
USP3-210ENST00000559192 WFDC11Q8NEX6 87 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 APC2O95996 2303 aa5.53□□□□□ -1.52
USP3-210ENST00000559192 M0QXV9 152 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 UQCRQO14949 82 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 CRIP1P50238 77 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 ZFP2Q6ZN57 461 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 STHQ8IWL8 128 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 KIAA1549Q9HCM3 1950 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 CEP250Q9BV73 2442 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 CRYGCP07315 174 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 ATP6V0E2Q8NHE4 81 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 PTH2Q96A98 100 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 RHPN1-AS1Q9BWJ2 59 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 ORMDL1Q9P0S3 153 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 C16orf54Q6UWD8 224 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 C7orf69Q9H7B7 122 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 KAAG1Q9UBP8 84 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 CEP192Q8TEP8 1941 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 ATP5J2P56134 94 aa5.52□□□□□ -1.53
USP3-210ENST00000559192 HERVK_113P63121 156 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 RNASE13Q5GAN3 156 aaKnown RBP5.51□□□□□ -1.53
USP3-210ENST00000559192 C20orf173Q96LM9 149 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 SPANXB1Q9NS25 103 aaPredicted RBP5.51□□□□□ -1.53
USP3-210ENST00000559192 SDHAF1A6NFY7 115 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 OVOL3O00110 214 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 NXPH4O95158 308 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 IGLV2-11P01706 119 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 MP68P56378 58 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 C22orf34Q6ZV56 151 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 TRPT1Q86TN4 253 aaKnown RBP5.51□□□□□ -1.53
USP3-210ENST00000559192 C5orf42Q9H799 3197 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 USF3Q68DE3 2245 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 IGLV11-55A0A075B6I3 123 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 IGHV1OR15-1A0A075B7D0 117 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 NDUFC2-KCTD14E9PQ53 114 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 OOSP1A8MZH6 123 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 NDUFS5O43920 106 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 IGHV3-53P01767 116 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 CTSGP08311 255 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 PLA2G2CQ5R387 149 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 SS18Q15532 418 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
USP3-210ENST00000559192 TRBV6-1A0A0K0K1D8 114 aa5.5□□□□□ -1.53
USP3-210ENST00000559192 DEFB1P60022 68 aa5.5□□□□□ -1.53
USP3-210ENST00000559192 C14orf132Q9NPU4 83 aa5.5□□□□□ -1.53
USP3-210ENST00000559192 TRGV1A0A0A0MS02 117 aa5.5□□□□□ -1.53
USP3-210ENST00000559192 HOXB4P17483 251 aaPredicted RBP5.5□□□□□ -1.53
USP3-210ENST00000559192 GRNP28799 593 aaKnown RBP5.5□□□□□ -1.53
USP3-210ENST00000559192 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms