RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 LOC105371267A0A1B0GV96 52 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 HTN3P15516 51 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 ZNF138P52744 262 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 FOXA3P55318 350 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 IGFL4Q6B9Z1 124 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 C15orf53Q8NAA6 179 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 DKK2Q9UBU2 259 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 NAT8BQ9UHF3 227 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 GOLT1BQ9Y3E0 138 aa11.38□□□□□ -0.59
CDC42BPB-203ENST00000558867 MT-ND6P03923 174 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 TRGC2P03986 189 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 SMUG1Q53HV7 270 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 FAM222AQ5U5X8 452 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
CDC42BPB-203ENST00000558867 CRIP1P50238 77 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 Q6AWC8 147 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 WDR73Q6P4I2 378 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
CDC42BPB-203ENST00000558867 HSPG2P98160 4391 aa11.35□□□□□ -0.59
CDC42BPB-203ENST00000558867 DAD1P61803 113 aa11.35□□□□□ -0.59
CDC42BPB-203ENST00000558867 OR10J6PQ8NGY7 276 aa11.35□□□□□ -0.59
CDC42BPB-203ENST00000558867 C8orf49Q96NF6 230 aa11.35□□□□□ -0.59
CDC42BPB-203ENST00000558867 XKRY2A2RUG3 117 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 FOXI2Q6ZQN5 318 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 NUP35Q8NFH5 326 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 CLUHP3Q96NS8 147 aa11.34□□□□□ -0.59
CDC42BPB-203ENST00000558867 FABP5P3A8MUU1 101 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 SH2D1AO60880 128 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H1AQ02539 215 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 ERCC8Q13216 396 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 Q8TAT8 98 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 FRZBQ92765 325 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
CDC42BPB-203ENST00000558867 A0A1B0GXF2 115 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 CRISP2P16562 243 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 FXYD7P58549 80 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 TNP2Q05952 138 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 TMEM208Q9BTX3 173 aa11.32□□□□□ -0.6
CDC42BPB-203ENST00000558867 A0A1B0GW15 77 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 S100A6P06703 90 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 TCL1AP56279 114 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
CDC42BPB-203ENST00000558867 NBDYA0A0U1RRE5 68 aa11.3□□□□□ -0.6
CDC42BPB-203ENST00000558867 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPB-203ENST00000558867 COA6Q5JTJ3 125 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-203ENST00000558867 Q8N1X5 172 aa11.3□□□□□ -0.6
CDC42BPB-203ENST00000558867 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
CDC42BPB-203ENST00000558867 CCL18P55774 89 aa11.29□□□□□ -0.6
CDC42BPB-203ENST00000558867 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
CDC42BPB-203ENST00000558867 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
CDC42BPB-203ENST00000558867 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
CDC42BPB-203ENST00000558867 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
CDC42BPB-203ENST00000558867 A0A0J9YX75 114 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 A8MTW9 85 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 S100A8P05109 93 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 CTRLP40313 264 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 HBBP68871 147 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 SCRT2Q9NQ03 307 aa11.28□□□□□ -0.6
CDC42BPB-203ENST00000558867 A0A1B0GUT8 65 aa11.27□□□□□ -0.61
CDC42BPB-203ENST00000558867 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms