RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RPL39LQ96EH5 51 aaKnown RBP7.89□□□□□ -1.15
TPM1-210ENST00000558264 LAMTOR2Q9Y2Q5 125 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 STPG4Q8N801 248 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 IFI27L1Q96BM0 104 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 A0A1W2PRX2 142 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 CD7P09564 240 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 Q6ZVH6 145 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 MYOZ3Q8TDC0 251 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 DKK2Q9UBU2 259 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 WNK1Q9H4A3 2382 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 PDZD2O15018 2839 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 MUC4Q99102 2169 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 TMEM89A2RUT3 159 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 K7EQG2 157 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
TPM1-210ENST00000558264 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
TPM1-210ENST00000558264 AKAP9Q99996 3911 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 KLLNB2CW77 178 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 IGHV4-4A0A075B6R2 117 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 A0A087WWL8 130 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 A0A0J9YX75 114 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 HTN1P15515 57 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 ST20Q9HBF5 79 aa7.87□□□□□ -1.15
TPM1-210ENST00000558264 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
TPM1-210ENST00000558264 IGLV2-18A0A075B6J9 118 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 DNAJC9-AS1A6NH13 148 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 APRG1Q8IVJ8 170 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 SCRT2Q9NQ03 307 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 ESM1Q9NQ30 184 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 CD5LO43866 347 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 PRM2P04554 102 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 Q6ZSV7 163 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 Q8N8P6 123 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 RASL10AQ92737 203 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 DPF1Q92782 380 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 MDFICQ9P1T7 246 aa7.86□□□□□ -1.15
TPM1-210ENST00000558264 C7orf71A4D174 169 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 PRSS1P07477 247 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
TPM1-210ENST00000558264 FCER1GP30273 86 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 SLC25A34Q6PIV7 304 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 DLX4Q92988 240 aaPredicted RBP7.85□□□□□ -1.15
TPM1-210ENST00000558264 FASNP49327 2511 aaKnown RBP7.85□□□□□ -1.15
TPM1-210ENST00000558264 LGALS9O00182 355 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 DEFB131AP59861 70 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 DPH3P1Q9H4G8 78 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 LINC01619G3V211 115 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 SMIM17P0DL12 118 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 MPV17L2Q567V2 206 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 TMEM61Q8N0U2 210 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 RNF152Q8N8N0 203 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 FOXC2Q99958 501 aa7.85□□□□□ -1.15
TPM1-210ENST00000558264 HECTD1Q9ULT8 2610 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 J3QKU1 62 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 ERASQ7Z444 233 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 Q8N1Y9 231 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 Q8N2B8 174 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 OR1N2Q8NGR9 330 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 AP1S3Q96PC3 154 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 YAE1D1Q9NRH1 226 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 UNC79Q9P2D8 2635 aa7.84□□□□□ -1.15
TPM1-210ENST00000558264 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.15
TPM1-210ENST00000558264 KMT2BQ9UMN6 2715 aaPredicted RBP7.84□□□□□ -1.15
TPM1-210ENST00000558264 LAGE3Q14657 143 aa7.84□□□□□ -1.16
TPM1-210ENST00000558264 LGALS9BQ3B8N2 356 aa7.84□□□□□ -1.16
TPM1-210ENST00000558264 COL5A1-AS1Q5SY13 56 aa7.84□□□□□ -1.16
TPM1-210ENST00000558264 LGALS9CQ6DKI2 356 aa7.84□□□□□ -1.16
TPM1-210ENST00000558264 SMIM2Q9BVW6 85 aa7.84□□□□□ -1.16
TPM1-210ENST00000558264 MRPS16Q9Y3D3 137 aaKnown RBP7.84□□□□□ -1.16
TPM1-210ENST00000558264 F5H697 171 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 NUDT3O95989 172 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 CDKN1BP46527 198 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 NMUP48645 174 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 SUMO2P61956 95 aaKnown RBP7.83□□□□□ -1.16
TPM1-210ENST00000558264 OR9G4Q8NGQ1 327 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 MRAP2Q96G30 205 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 LINC01546A6NGU7 62 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1A1P0DJD3 496 aaKnown RBP7.83□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1CP0DJD4 496 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1FQ15415 496 aaKnown RBP7.83□□□□□ -1.16
TPM1-210ENST00000558264 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 NOTCH2Q04721 2471 aa7.83□□□□□ -1.16
TPM1-210ENST00000558264 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 ODF1Q14990 250 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 SAMD13Q5VXD3 122 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 C4orf3Q8WVX3 66 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 SMR3AQ99954 134 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 IGHV3-16A0A0C4DH30 117 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
TPM1-210ENST00000558264 DYNLRB2Q8TF09 96 aa7.82□□□□□ -1.16
TPM1-210ENST00000558264 GCN1Q92616 2671 aaKnown RBP7.81□□□□□ -1.16
TPM1-210ENST00000558264 PRSS47A8MTI9 375 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms