RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PCNX2A6NKB5 2137 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 TRBV24-1A0A075B6N3 115 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 TRAV3A0A0B4J244 114 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 A0A0B4J2C4 111 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 IGHV1-3A0A0C4DH29 117 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 IGHV1-24A0A0C4DH33 117 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 LOC107984156A0A0G2JMH3 177 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 TMEM235A6NFC5 223 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 C17orf51A8MQB3 221 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 B4DSR2 109 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 MUC22E2RYF6 1773 aaPredicted RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 H3BMM0 161 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 J3QLW9 94 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 NUPR1O60356 82 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 IGHV1-46P01743 117 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 PIRTP0C851 137 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 SAA1P0DJI8 122 aaPredicted RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 TOP2AP11388 1531 aaKnown RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 ADCYAP1P18509 176 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 NFYAP23511 347 aaPredicted RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 SCN4AP35499 1836 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 PRDM15P57071 1507 aaPredicted RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 SEC11AP67812 179 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 KIF1AQ12756 1690 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 TARBP1Q13395 1621 aaKnown RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 HMGN3Q15651 99 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 ITSN1Q15811 1721 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 MIAQ16674 131 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 FAM229BQ4G0N7 80 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 BVES-AS1Q5T3Y7 98 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 HEPN1Q6WQI6 88 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 ATP11AUNQ6ZP68 121 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 SDIM1Q6ZPB5 146 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 C2orf91Q6ZV80 131 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 SLC25A26Q70HW3 274 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 C10orf71Q711Q0 1435 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 C5orf38Q86SI9 138 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 ARL17AQ8IVW1 177 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 TMEM105Q8N8V8 129 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 C1orf64Q8NEQ6 169 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 UBE2WQ96B02 151 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 SCAF11Q99590 1463 aaKnown RBP1.53□□□□□ -2.16
SPG11-206ENST00000558093 RETNLBQ9BQ08 111 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 PEAK1Q9H792 1746 aa1.53□□□□□ -2.16
SPG11-206ENST00000558093 DOCK11Q5JSL3 2073 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 MGAMO43451 1857 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 STRCP1A6NGW2 1772 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SIPA1L3O60292 1781 aaPredicted RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 CLTCQ00610 1675 aaKnown RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 AHDC1Q5TGY3 1603 aaPredicted RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 RAPGEF6Q8TEU7 1601 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 MAP3K4Q9Y6R4 1608 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 ARHGEF12Q9NZN5 1544 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 GOLGA3Q08378 1498 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 PLIN4Q96Q06 1357 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 IGKV2D-26A0A0A0MRZ7 120 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 TRBV7-7A0A0K0K1E9 115 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 A0A1W2PPM0 123 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 A0A1W2PQD3 144 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 ATOX1O00244 68 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 LYRM1O43325 122 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SIX6O95475 246 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 NPYP01303 97 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 COL8A2P25067 703 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 ATP5EP56381 51 aaPredicted RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 WFDC2Q14508 124 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 ETDBQ3ZM63 59 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SPATA45Q537H7 98 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 Q8IYB0 196 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 C15orf53Q8NAA6 179 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SMCR5Q8TEV8 140 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 PPDPFLQ8WWR9 84 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SLC50A1Q9BRV3 221 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 LINC00574Q9H8X3 128 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 CACFD1Q9UGQ2 172 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 LY96Q9Y6Y9 160 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 COL11A1P12107 1806 aaPredicted RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 SLX4Q8IY92 1834 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 LAMB1P07942 1786 aa1.52□□□□□ -2.17
SPG11-206ENST00000558093 COL5A3P25940 1745 aaPredicted RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 TNS1Q9HBL0 1735 aaKnown RBP1.52□□□□□ -2.17
SPG11-206ENST00000558093 SHROOM2Q13796 1616 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 RPRD2Q5VT52 1461 aaKnown RBP1.51□□□□□ -2.17
SPG11-206ENST00000558093 ANKARQ7Z5J8 1434 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 ARHGAP32A7KAX9 2087 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 IGKV1D-37A0A075B6S9 117 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 IGKV1OR2-108A0A075B7D4 117 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 A0A087WXM4 84 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 TRAV14DV4A0A0A6YYC5 116 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 MUC21A0A140T8X8 626 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 hDV103S1A0JD37 113 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 C16orf90A8MZG2 172 aa1.51□□□□□ -2.17
SPG11-206ENST00000558093 E7EQL1 145 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms