RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PHLDA1Q8WV24 401 aaPredicted RBP15.1■□□□□ 0.01
CASC4-204ENST00000557945 ISOC2Q96AB3 205 aa15.1■□□□□ 0.01
CASC4-204ENST00000557945 ZNF876PQ49A33 203 aa15.09■□□□□ 0.01
CASC4-204ENST00000557945 PHLDA3Q9Y5J5 127 aa15.09■□□□□ 0.01
CASC4-204ENST00000557945 F8W036 122 aa15.08■□□□□ 0
CASC4-204ENST00000557945 C15orf54Q8N8G6 183 aa15.08■□□□□ 0
CASC4-204ENST00000557945 RASL10AQ92737 203 aa15.08■□□□□ 0
CASC4-204ENST00000557945 TPPP3Q9BW30 176 aa15.08■□□□□ 0
CASC4-204ENST00000557945 DEFB131BA0A096LNP1 70 aa15.07■□□□□ 0
CASC4-204ENST00000557945 TRAV10A0A0B4J240 114 aa15.07■□□□□ 0
CASC4-204ENST00000557945 SFRP2Q96HF1 295 aa15.07■□□□□ 0
CASC4-204ENST00000557945 OSTCQ9NRP0 149 aa15.07■□□□□ 0
CASC4-204ENST00000557945 ATP5G1P05496 136 aa15.06■□□□□ 0
CASC4-204ENST00000557945 MED14OSP0DP75 135 aa15.06■□□□□ 0
CASC4-204ENST00000557945 FER1L6-AS1Q8NA97 138 aa15.06■□□□□ 0
CASC4-204ENST00000557945 SCRT2Q9NQ03 307 aa15.06■□□□□ 0
CASC4-204ENST00000557945 M0R381 172 aa15.05■□□□□ -0
CASC4-204ENST00000557945 IGHV3-53P01767 116 aa15.05■□□□□ -0
CASC4-204ENST00000557945 ADCYAP1P18509 176 aa15.05■□□□□ -0
CASC4-204ENST00000557945 SYT8Q8NBV8 401 aa15.05■□□□□ -0
CASC4-204ENST00000557945 OR10G8Q8NGN5 311 aa15.05■□□□□ -0
CASC4-204ENST00000557945 MUC21A0A0G2JKD1 596 aa15.04■□□□□ -0
CASC4-204ENST00000557945 MUC21A0A140T8X8 626 aa15.04■□□□□ -0
CASC4-204ENST00000557945 SSTP61278 116 aa15.04■□□□□ -0
CASC4-204ENST00000557945 CEMP1Q6PRD7 247 aaPredicted RBP15.04■□□□□ -0
CASC4-204ENST00000557945 PTH2Q96A98 100 aa15.04■□□□□ -0
CASC4-204ENST00000557945 MUC4Q99102 2169 aa15.04■□□□□ -0
CASC4-204ENST00000557945 NUPR2A6NF83 97 aa15.03■□□□□ -0
CASC4-204ENST00000557945 A8MWL6 223 aa15.03■□□□□ -0
CASC4-204ENST00000557945 F5H768 121 aa15.03■□□□□ -0
CASC4-204ENST00000557945 C3orf84H3BNL1 204 aa15.03■□□□□ -0
CASC4-204ENST00000557945 OR5AL1P0C617 328 aa15.03■□□□□ -0
CASC4-204ENST00000557945 PNRC1Q12796 327 aaPredicted RBP15.03■□□□□ -0
CASC4-204ENST00000557945 DMRTA1Q5VZB9 504 aa15.03■□□□□ -0
CASC4-204ENST00000557945 ZFP82Q8N141 532 aa15.03■□□□□ -0
CASC4-204ENST00000557945 OR10AG1Q8NH19 301 aa15.03■□□□□ -0
CASC4-204ENST00000557945 C18orf15Q96N68 181 aa15.03■□□□□ -0
CASC4-204ENST00000557945 A0A1W2PPQ1 181 aa15.02■□□□□ -0
CASC4-204ENST00000557945 SNAI2O43623 268 aa15.02■□□□□ -0
CASC4-204ENST00000557945 IGLC6P0CF74 106 aa15.02■□□□□ -0
CASC4-204ENST00000557945 CT83Q5H943 113 aa15.02■□□□□ -0
CASC4-204ENST00000557945 SPANXN1Q5VSR9 72 aa15.02■□□□□ -0
CASC4-204ENST00000557945 OR4C5Q8NGB2 326 aa15.02■□□□□ -0
CASC4-204ENST00000557945 SSBP4Q9BWG4 385 aaPredicted RBP15.02■□□□□ -0
CASC4-204ENST00000557945 SEC11CQ9BY50 192 aa15.02■□□□□ -0
CASC4-204ENST00000557945 NDUFAF3Q9BU61 184 aa15.01□□□□□ -0.01
CASC4-204ENST00000557945 V9GYV3 84 aa15.01□□□□□ -0.01
CASC4-204ENST00000557945 TRAV4A0A0B4J268 109 aa15□□□□□ -0.01
CASC4-204ENST00000557945 PIK3CD-AS1Q5SR53 167 aa15□□□□□ -0.01
CASC4-204ENST00000557945 LYZL1Q6UWQ5 148 aa15□□□□□ -0.01
CASC4-204ENST00000557945 KLK5Q9Y337 293 aaPredicted RBP15□□□□□ -0.01
CASC4-204ENST00000557945 F2Z2F3 143 aa14.99□□□□□ -0.01
CASC4-204ENST00000557945 POM121L12Q8N7R1 296 aa14.99□□□□□ -0.01
CASC4-204ENST00000557945 TSKUQ8WUA8 353 aa14.99□□□□□ -0.01
CASC4-204ENST00000557945 GTSF1Q8WW33 167 aa14.99□□□□□ -0.01
CASC4-204ENST00000557945 ZNF479Q96JC4 524 aa14.99□□□□□ -0.01
CASC4-204ENST00000557945 IGLL5B9A064 214 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 RS1O15537 224 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 HOXA5P20719 270 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 CFAP126Q5VTH2 177 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 JPT2Q9H910 190 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 DNAH7Q8WXX0 4024 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 TRGV4A0A0C4DH28 118 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 A8MWV9 139 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 CACNG7P62955 275 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 CASC10Q5T4H9 136 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 PGLYRP4Q96LB8 373 aa14.98□□□□□ -0.01
CASC4-204ENST00000557945 NXPH4O95158 308 aa14.97□□□□□ -0.01
CASC4-204ENST00000557945 MT-ND4LP03901 98 aa14.97□□□□□ -0.01
CASC4-204ENST00000557945 CTRLP40313 264 aa14.97□□□□□ -0.01
CASC4-204ENST00000557945 RNF212Q495C1 297 aa14.97□□□□□ -0.01
CASC4-204ENST00000557945 SLC7A5P1Q8MH63 180 aa14.97□□□□□ -0.01
CASC4-204ENST00000557945 IGHV3-73A0A0B4J1V6 119 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 PPP1R2P9O14990 202 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 C10orf91Q5T1B1 145 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 TMEM88Q6PEY1 159 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 SAMD10Q9BYL1 202 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 GFRA4Q9GZZ7 299 aa14.96□□□□□ -0.02
CASC4-204ENST00000557945 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
CASC4-204ENST00000557945 FHL2Q14192 279 aa14.95□□□□□ -0.02
CASC4-204ENST00000557945 IGHV4-4A0A075B6R2 117 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 TRAV26-1A0A087WT03 109 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 A0A087WWL8 130 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 A0A0J9YY99 117 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 FAM231BA6NCW3 169 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 FOXA3P55318 350 aaPredicted RBP14.94□□□□□ -0.02
CASC4-204ENST00000557945 FAM74A4Q5TZK3 123 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 BORCS7Q96B45 105 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 MSRB1Q9NZV6 116 aa14.94□□□□□ -0.02
CASC4-204ENST00000557945 CARHSP1Q9Y2V2 147 aaKnown RBP14.94□□□□□ -0.02
CASC4-204ENST00000557945 CIDEAO60543 219 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 NTF3P20783 257 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 TWIST1Q15672 202 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 NDUFA5Q16718 116 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 WDR73Q6P4I2 378 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 ANAPC16Q96DE5 110 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 HHLA3Q9XRX5 114 aa14.93□□□□□ -0.02
CASC4-204ENST00000557945 RHODO00212 210 aa14.92□□□□□ -0.02
CASC4-204ENST00000557945 SLAQ13239 276 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms