RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 A0A1W2PRE2 83 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 PGPEP1LA6NFU8 196 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 IFNA7P01567 189 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 S100A4P26447 101 aaKnown RBP9.85□□□□□ -0.83
SHMT2-235ENST00000557740 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 Q5BKY6 102 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 RPL7L1Q6DKI1 246 aaKnown RBP9.85□□□□□ -0.83
SHMT2-235ENST00000557740 Q9HAA7 133 aa9.85□□□□□ -0.83
SHMT2-235ENST00000557740 TRAV34A0A0B4J273 112 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 RNASE3P12724 160 aaKnown RBP9.84□□□□□ -0.83
SHMT2-235ENST00000557740 GCSHP23434 173 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 ASIPP42127 132 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 UBE2G2P60604 165 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 LELP1Q5T871 98 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 ARL2-SNX15V9GYD0 113 aa9.84□□□□□ -0.83
SHMT2-235ENST00000557740 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 CTXND1A0A1B0GTU2 59 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 RNF222A6NCQ9 220 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 XGP55808 180 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 Q86TA4 180 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 LINC00479Q96M42 142 aa9.83□□□□□ -0.84
SHMT2-235ENST00000557740 A8MWV9 139 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 PEX7O00628 323 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 ZNF726P1Q15940 193 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 LGALSLQ3ZCW2 172 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-235ENST00000557740 AKR1C8PQ5T2L2 129 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 OR2T35Q8NGX2 323 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-235ENST00000557740 FRZBQ92765 325 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 PARLQ9H300 379 aa9.82□□□□□ -0.84
SHMT2-235ENST00000557740 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 FABP5P3A8MUU1 101 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 GAGE1Q13065 139 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 GAGE4Q13068 117 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 GAGE5Q13069 117 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 Q5VSD8 79 aa9.81□□□□□ -0.84
SHMT2-235ENST00000557740 NKX6-2Q9C056 277 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-235ENST00000557740 LRCOL1A6NCL2 159 aa9.8□□□□□ -0.84
SHMT2-235ENST00000557740 B4DEV8 164 aa9.8□□□□□ -0.84
SHMT2-235ENST00000557740 FGF8P55075 233 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-235ENST00000557740 LAGE3Q14657 143 aa9.8□□□□□ -0.84
SHMT2-235ENST00000557740 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
SHMT2-235ENST00000557740 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
SHMT2-235ENST00000557740 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 H3BVH4 76 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 UBE2G1P62253 170 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 Q6ZSN1 163 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 Q8N814 137 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
SHMT2-235ENST00000557740 M0R036 132 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 RHODO00212 210 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 FMC1Q96HJ9 113 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 JPT2Q9H910 190 aa9.78□□□□□ -0.84
SHMT2-235ENST00000557740 SH2D1AO60880 128 aa9.77□□□□□ -0.85
SHMT2-235ENST00000557740 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
SHMT2-235ENST00000557740 OR11H4Q8NGC9 324 aa9.77□□□□□ -0.85
SHMT2-235ENST00000557740 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
SHMT2-235ENST00000557740 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-235ENST00000557740 A0A087WWC5 75 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 TRAV8-3A0A0A6YYJ7 113 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 ARPC5O15511 151 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-235ENST00000557740 ARMS2P0C7Q2 107 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 HAMPP81172 84 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 UFSP1Q6NVU6 142 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 Q8N3U1 123 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 STOML3Q8TAV4 291 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 TCEAL7Q9BRU2 100 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 SAMD10Q9BYL1 202 aa9.76□□□□□ -0.85
SHMT2-235ENST00000557740 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
SHMT2-235ENST00000557740 AKR1C3P42330 323 aa9.75□□□□□ -0.85
SHMT2-235ENST00000557740 DNLZQ5SXM8 178 aa9.75□□□□□ -0.85
SHMT2-235ENST00000557740 CST9LP1Q5W188 147 aa9.75□□□□□ -0.85
SHMT2-235ENST00000557740 C14orf178Q8N769 122 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-235ENST00000557740 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
SHMT2-235ENST00000557740 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
SHMT2-235ENST00000557740 FHITP49789 147 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms