RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FOXI1Q12951 378 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 IGHV1-69DA0A0B4J2H0 117 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 NPFFO15130 113 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 ADORA2A-AS1P86434 159 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 TCF15Q12870 199 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 CLEC2AQ6UVW9 174 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 GPHB5Q86YW7 130 aa8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 ZFHX2Q9C0A1 2572 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-211ENST00000557658 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 SOCS3O14543 225 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 DUSP14O95147 198 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 TSPAN13O95857 204 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 SPTBN2O15020 2390 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 NDUFA4O00483 81 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 GNRH2O43555 120 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 PSMB2P49721 201 aa8.93□□□□□ -0.98
VIPAS39-211ENST00000557658 CRYGDP07320 174 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 RPL32P62910 135 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 UNQ9165/PRO28630Q6UXU0 137 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 POM121L12Q8N7R1 296 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 KLHL30-AS1Q8NEE0 82 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 MOB4Q9Y3A3 225 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 DEFB1P60022 68 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 LINC00527Q9UJ94 153 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 TP53TG1Q9Y2A0 90 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 SPTA1P02549 2419 aa8.92□□□□□ -0.98
VIPAS39-211ENST00000557658 PTPRQQ9UMZ3 2332 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 TRBV7-9A0A0J9YWB2 115 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 CD7P09564 240 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 UBE2D3P61077 147 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 UBE2D2P62837 147 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 PMVKQ15126 192 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 TCTEX1D4Q5JR98 221 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 IGHV4OR15-8A0A075B7B6 117 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 A0A087WW49 117 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 A0A0J9YY99 117 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 NXPH4O95158 308 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 CRIP2P52943 208 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 RPL11P62913 178 aaKnown RBP8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 SYT8Q8NBV8 401 aa8.91□□□□□ -0.98
VIPAS39-211ENST00000557658 TSHBP01222 138 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 FOXC1Q12948 553 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 SFTA2Q6UW10 78 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 NDUFA11Q86Y39 141 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 TMEM141Q96I45 108 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 SPTBN1Q01082 2364 aaKnown RBP8.9□□□□□ -0.98
VIPAS39-211ENST00000557658 IGIPA6NJ69 53 aa8.9□□□□□ -0.99
VIPAS39-211ENST00000557658 F6UB75 175 aa8.9□□□□□ -0.99
VIPAS39-211ENST00000557658 TRBV12-3P01733 135 aa8.9□□□□□ -0.99
VIPAS39-211ENST00000557658 CKS1BP61024 79 aa8.9□□□□□ -0.99
VIPAS39-211ENST00000557658 MUC4Q99102 2169 aa8.9□□□□□ -0.99
VIPAS39-211ENST00000557658 VCYO14598 125 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 EMP1P54849 157 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 LINC00315P59091 139 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 LMO4P61968 165 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 ZNF418Q8TF45 676 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 KIR2DL4Q99706 377 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 TRBV20-1A0A075B6N2 111 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 NFE4Q86UQ8 179 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
VIPAS39-211ENST00000557658 PPDPFLQ8WWR9 84 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 PTPRZ1P23471 2315 aaPredicted RBP8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 A0A1W2PPR1 153 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 SUMO4Q6EEV6 95 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 NBASA2RRP1 2371 aa8.88□□□□□ -0.99
VIPAS39-211ENST00000557658 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 RPL39P62891 51 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 TEN1Q86WV5 123 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 BPESC1Q9GZL8 116 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 VCX2Q9H322 139 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 UBTD1Q9HAC8 227 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 F5H697 171 aa8.87□□□□□ -0.99
VIPAS39-211ENST00000557658 TCL1BO95988 128 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 CFC1BP0CG36 223 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 CFC1P0CG37 223 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 CRYBA4P53673 196 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 KLRB1Q12918 225 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms