RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 C10orf126Q8N4M7 172 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SMCR5Q8TEV8 140 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 RAB37Q96AX2 223 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 NMNAT3Q96T66 252 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 FXYD6Q9H0Q3 95 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SLC39A9Q9NUM3 307 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00527Q9UJ94 153 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 FIS1Q9Y3D6 152 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 COL11A1P12107 1806 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 KIAA1549Q9HCM3 1950 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 COL4A4P53420 1690 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV4-69A0A075B6H9 119 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV8-3A0A0A6YYJ7 113 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 BUB1B-PAK6H3BSN5 160 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 GNRH2O43555 120 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SNCGO76070 127 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV1-8P0DP01 117 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 RPL18Q07020 188 aaKnown RBP1.03□□□□□ -2.24
HIF1A-212ENST00000557538 KLKP1Q107X0 134 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 MIC13Q5XKP0 118 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CLEC19AQ6UXS0 136 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 CYP2G1PQ6ZSU1 146 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 AMN1Q8IY45 258 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF645Q8N7E2 425 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 SLC25A29Q8N8R3 303 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 UBALD1Q8TB05 177 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 PPP1R1CQ8WVI7 109 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 TOMM6Q96B49 74 aa1.03□□□□□ -2.24
HIF1A-212ENST00000557538 F6UB75 175 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 C3orf84H3BNL1 204 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 PEBP1P30086 187 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 FGF12P61328 243 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 SNRPFP62306 86 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 SNRPGP62308 76 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP11-1Q8IUC1 163 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 H1FXQ92522 213 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 TRGV9Q99603 122 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV5-51A0A0C4DH38 117 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1-16P04430 117 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 PTHLHP12272 177 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 FXYD2P54710 66 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 RPL23P62829 140 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 CCL8P80075 99 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 ASB16-AS1Q495Z4 193 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 TOMM5Q8N4H5 51 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 SERP2Q8N6R1 65 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 PROK2Q9HC23 129 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 LY96Q9Y6Y9 160 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 SPTBN5Q9NRC6 3674 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 PHF3Q92576 2039 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV7-1A0A0A6YYK4 115 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 BPY2O14599 106 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 NPC2P61916 151 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 LINC01554Q52M75 96 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 RPL7L1Q6DKI1 246 aaKnown RBP1.02□□□□□ -2.25
HIF1A-212ENST00000557538 C7orf65Q6ZTY9 151 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 OR8A1Q8NGG7 326 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM230Q96A57 120 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 LCTP09848 1927 aa1.02□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV7-3A0A075B6L6 115 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV8-1A0A0A6YYK1 113 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1-12A0A0C4DH73 117 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2L5PA0A1B0GUS4 154 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 RBMY1BA6NDE4 496 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 RBMY1EA6NEQ0 496 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 C9JCJ5 164 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM256-PLSCR3K7ERE1 68 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ATOX1O00244 68 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 SLC25A14O95258 325 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 LTAP01374 205 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1D-12P01611 117 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 HBDP02042 147 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 RBMY1DP0C7P1 496 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TLX1NBP0CAT3 122 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 SMIM13P0DJ93 91 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 RBMY1A1P0DJD3 496 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 INAFM2P0DMQ5 153 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 CCL5P13501 91 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2D1P51668 147 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 MP68P56378 58 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 CAV3P56539 151 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 MTPNP58546 118 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2L3P68036 154 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 HBBP68871 147 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 INSL4Q14641 139 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 C6orf99Q4VX62 202 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ORMDL2Q53FV1 153 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 NDUFA11Q86Y39 141 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 RBMXL1Q96E39 390 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ABHD14BQ96IU4 210 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 COL4A5P29400 1685 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ZFHX4Q86UP3 3567 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 SSC5DA1L4H1 1573 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV1-24A0A0C4DH33 117 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IRGMA1A4Y4 181 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 H3BP45 60 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 COX7A2LO14548 114 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 NDUFB3O43676 98 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 BCE1O60756 84 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 LGALS3P17931 250 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms