RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
NEDD1-212ENST00000557478 LGALSLQ3ZCW2 172 aaPredicted RBP11.98□□□□□ -0.49
NEDD1-212ENST00000557478 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
NEDD1-212ENST00000557478 Q86TA4 180 aa11.98□□□□□ -0.49
NEDD1-212ENST00000557478 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
NEDD1-212ENST00000557478 IL36BQ9NZH7 164 aa11.98□□□□□ -0.49
NEDD1-212ENST00000557478 LINC00315P59091 139 aa11.97□□□□□ -0.49
NEDD1-212ENST00000557478 FAM162BQ5T6X4 162 aa11.97□□□□□ -0.49
NEDD1-212ENST00000557478 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
NEDD1-212ENST00000557478 SYT8Q8NBV8 401 aa11.97□□□□□ -0.49
NEDD1-212ENST00000557478 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
NEDD1-212ENST00000557478 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 TRAV34A0A0B4J273 112 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 DNAH10OSP0CZ25 163 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 RNASE3P12724 160 aaKnown RBP11.96□□□□□ -0.49
NEDD1-212ENST00000557478 DNLZQ5SXM8 178 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 CST9LP1Q5W188 147 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 MBD3L1Q8WWY6 194 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 LINC00479Q96M42 142 aa11.96□□□□□ -0.49
NEDD1-212ENST00000557478 B4DEV8 164 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 BCL2L11O43521 198 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 PFDN1O60925 122 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 SFT2D1Q8WV19 159 aa11.95□□□□□ -0.5
NEDD1-212ENST00000557478 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
NEDD1-212ENST00000557478 RHODO00212 210 aa11.94□□□□□ -0.5
NEDD1-212ENST00000557478 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
NEDD1-212ENST00000557478 ERVFC1-1P60608 527 aa11.94□□□□□ -0.5
NEDD1-212ENST00000557478 ZNF575Q86XF7 245 aa11.94□□□□□ -0.5
NEDD1-212ENST00000557478 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
NEDD1-212ENST00000557478 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 PGPEP1LA6NFU8 196 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 LTAP01374 205 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 AKR1C3P42330 323 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 RAB5CP51148 216 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 SPATA12Q7Z6I5 190 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 MSRB1Q9NZV6 116 aa11.93□□□□□ -0.5
NEDD1-212ENST00000557478 H2AFB1P0C5Y9 115 aa11.92□□□□□ -0.5
NEDD1-212ENST00000557478 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
NEDD1-212ENST00000557478 GTSF1LQ9H1H1 148 aa11.92□□□□□ -0.5
NEDD1-212ENST00000557478 PCLOQ9Y6V0 5065 aa11.92□□□□□ -0.5
NEDD1-212ENST00000557478 KRBOX1C9JBD0 128 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 SMLR1H3BR10 107 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 PAGE4O60829 102 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 CRYGDP07320 174 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 ZNF674Q2M3X9 581 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 LINC01556Q5JQF7 62 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 LELP1Q5T871 98 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 PHLDA3Q9Y5J5 127 aa11.91□□□□□ -0.5
NEDD1-212ENST00000557478 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
NEDD1-212ENST00000557478 A0A087WWC5 75 aa11.9□□□□□ -0.5
NEDD1-212ENST00000557478 SH2D1AO60880 128 aa11.9□□□□□ -0.5
NEDD1-212ENST00000557478 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
NEDD1-212ENST00000557478 ATP6V0E2Q8NHE4 81 aa11.9□□□□□ -0.5
NEDD1-212ENST00000557478 PARLQ9H300 379 aa11.9□□□□□ -0.5
NEDD1-212ENST00000557478 RYR1P21817 5038 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 CXCL1P09341 107 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 OR10J3Q5JRS4 329 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 ZFP82Q8N141 532 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
NEDD1-212ENST00000557478 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
NEDD1-212ENST00000557478 LOC100131303A0A0U1RQF7 123 aa11.88□□□□□ -0.51
NEDD1-212ENST00000557478 ARMS2P0C7Q2 107 aa11.88□□□□□ -0.51
NEDD1-212ENST00000557478 TRAV1-1A0A0B4J248 108 aa11.87□□□□□ -0.51
NEDD1-212ENST00000557478 H3BVH4 76 aa11.87□□□□□ -0.51
NEDD1-212ENST00000557478 CRIP1P50238 77 aa11.87□□□□□ -0.51
NEDD1-212ENST00000557478 LAGE3Q14657 143 aa11.87□□□□□ -0.51
NEDD1-212ENST00000557478 SCRT2Q9NQ03 307 aa11.87□□□□□ -0.51
NEDD1-212ENST00000557478 M0R036 132 aa11.86□□□□□ -0.51
NEDD1-212ENST00000557478 DMRTA1Q5VZB9 504 aa11.86□□□□□ -0.51
NEDD1-212ENST00000557478 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
NEDD1-212ENST00000557478 SFRP2Q96HF1 295 aa11.86□□□□□ -0.51
NEDD1-212ENST00000557478 TRBV10-1A0A0K0K1A3 114 aa11.85□□□□□ -0.51
NEDD1-212ENST00000557478 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
NEDD1-212ENST00000557478 TOR2AQ5JU69 321 aa11.85□□□□□ -0.51
NEDD1-212ENST00000557478 TCTE3Q8IZS6 198 aa11.85□□□□□ -0.51
NEDD1-212ENST00000557478 PSCAO43653 123 aa11.84□□□□□ -0.51
NEDD1-212ENST00000557478 UFSP1Q6NVU6 142 aa11.84□□□□□ -0.51
NEDD1-212ENST00000557478 SMIM12Q96EX1 92 aa11.84□□□□□ -0.51
NEDD1-212ENST00000557478 MLST8Q9BVC4 326 aa11.84□□□□□ -0.51
NEDD1-212ENST00000557478 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
NEDD1-212ENST00000557478 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
NEDD1-212ENST00000557478 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
NEDD1-212ENST00000557478 A0A087WTM6 91 aa11.82□□□□□ -0.52
NEDD1-212ENST00000557478 SCO2A0A1W2PP80 73 aa11.82□□□□□ -0.52
NEDD1-212ENST00000557478 GRIFINA4D1Z8 144 aa11.82□□□□□ -0.52
NEDD1-212ENST00000557478 PDE6DO43924 150 aa11.82□□□□□ -0.52
NEDD1-212ENST00000557478 IFNA1P01562 189 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms