RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 HERVK_113P63121 156 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 ORMDL2Q53FV1 153 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 C9orf153Q5TBE3 101 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 C12orf73Q69YU5 71 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 BAGE3Q86Y29 109 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 BAGE2Q86Y30 109 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 OR11H6Q8NGC7 330 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 MRPL30Q8TCC3 161 aaKnown RBP2.78□□□□□ -1.96
PRPF39-212ENST00000557477 PIFOQ8TCI5 191 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 KCNS1Q96KK3 526 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 AMELYQ99218 206 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 C20orf78Q9BR46 151 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM70Q9BUB7 260 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM191AQ9H0A3 160 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM222Q9H0R3 208 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TVP23BQ9NYZ1 205 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 POLR1DQ9Y2S0 133 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 RTTNQ86VV8 2226 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 COL6A5A8TX70 2615 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 NCKAP5O14513 1909 aa2.78□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF469Q96JG9 3925 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ATRQ13535 2644 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 HRNRQ86YZ3 2850 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 TRBV20-1A0A075B6N2 111 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 TRAV9-1A0A075B6T8 112 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 TRAV1-2A0A0B4J238 106 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 C5orf49A4QMS7 147 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 A8MT66 165 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 H3BMG7 143 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 M0R1B8 84 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 NUPR1O60356 82 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF737O75373 536 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 DPM2O94777 84 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 NDUFC2O95298 119 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 NAPSAO96009 420 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 C3orf79P0CE67 100 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF708P17019 499 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 PPP1CCP36873 323 aaKnown RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 OPRK1P41145 380 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ASIPP42127 132 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 PSMB3P49720 205 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 DSCR4P56555 118 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 LINC00315P59091 139 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 BSPH1Q075Z2 132 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 LOXL1Q08397 574 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 LINC00483Q53H64 154 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 LYRM7Q5U5X0 104 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 Q5XG85 94 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF322Q6U7Q0 402 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 DGAT2L6Q6ZPD8 337 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 CYP2G1PQ6ZSU1 146 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 BPIFA4PQ86YQ2 179 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ATOH7Q8N100 152 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 C10orf126Q8N4M7 172 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 WDR31Q8NA23 367 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 OR4X2Q8NGF9 303 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 OR51H1Q8NH63 302 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 SGMS2Q8NHU3 365 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 FAM213BQ8TBF2 198 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 PPDPFLQ8WWR9 84 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ADAT3Q96EY9 351 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 PRELID3AQ96N28 172 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 AGMATQ9BSE5 352 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 CHST6Q9GZX3 395 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 NAA60Q9H7X0 242 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 BCL2L10Q9HD36 194 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 CMC2Q9NRP2 79 aa2.77□□□□□ -1.97
PRPF39-212ENST00000557477 FBN1P35555 2871 aaKnown RBP2.77□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF407Q9C0G0 2248 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 DSPPQ9NZW4 1301 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 A0A1B0GV50 99 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 J3QQQ9 107 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 M0R129 80 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 UQCRQO14949 82 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ARL6IP5O75915 188 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 LYZL6O75951 148 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 NCR2O95944 276 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 IGHMP01871 453 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ATP5G1P05496 136 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 LGALS1P09382 135 aaKnown RBP2.76□□□□□ -1.97
PRPF39-212ENST00000557477 CECR9P0C854 216 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ATP5G3P48201 142 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM258P61165 79 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 WFDC2Q14508 124 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF141Q15928 474 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ETDBQ3ZM63 59 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 IBA57Q5T440 356 aaKnown RBP2.76□□□□□ -1.97
PRPF39-212ENST00000557477 MORN3Q6PF18 240 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-212ENST00000557477 AMTNQ6UX39 209 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM136Q6ZRR5 245 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 SPATA12Q7Z6I5 190 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 WDR86Q86TI4 376 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 C1orf158Q8N1D5 194 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 C3orf22Q8N5N4 141 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 OTOSQ8NHW6 89 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 UBALD1Q8TB05 177 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms