RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
RTN1-208ENST00000557422 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 C9JQL5 133 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 PDE6DO43924 150 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 ARL14EPLP0DKL9 152 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 GYPEP15421 78 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 GCHFRP30047 84 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 ZNF415Q09FC8 603 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 ERCC8Q13216 396 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 MIR17HGQ75NE6 70 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 FAM19A4Q96LR4 140 aa8.11□□□□□ -1.11
RTN1-208ENST00000557422 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
RTN1-208ENST00000557422 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 F6UZH7 168 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
RTN1-208ENST00000557422 SNAPINO95295 136 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 APOC3P02656 99 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
RTN1-208ENST00000557422 FAM74A3Q4VXF1 159 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 FAM167A-AS1Q96KT0 104 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 AGPAT4-IT1Q9H0P7 198 aa8.1□□□□□ -1.11
RTN1-208ENST00000557422 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 A0A1W2PRE2 83 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 M0R3E3 92 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 GPX1P07203 203 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 Q6ZQT7 251 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
RTN1-208ENST00000557422 ZNF479Q96JC4 524 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 LINC00477Q96M19 166 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 TCEAL7Q9BRU2 100 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 PAXXQ9BUH6 204 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 SLC25A2Q9BXI2 301 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 Q9HAA7 133 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 TMEM14CQ9P0S9 112 aa8.09□□□□□ -1.11
RTN1-208ENST00000557422 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 TRAV5A0A0B4J249 113 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 OR7C2O60412 319 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 PAGE4O60829 102 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 ORM1P02763 201 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 CRISP2P16562 243 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 LINC01556Q5JQF7 62 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 PRR9Q5T870 116 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 CYB561D1Q8N8Q1 229 aa8.08□□□□□ -1.12
RTN1-208ENST00000557422 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 ZNF253O75346 499 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
RTN1-208ENST00000557422 PNRC1Q12796 327 aaPredicted RBP8.07□□□□□ -1.12
RTN1-208ENST00000557422 WFDC2Q14508 124 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 CST9LP1Q5W188 147 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 SCXQ7RTU7 201 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 ZFAND2AQ8N6M9 145 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 BLNKQ8WV28 456 aa8.07□□□□□ -1.12
RTN1-208ENST00000557422 C9JCJ5 164 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 TIRAPP58753 221 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 UBE2L3P68036 154 aaKnown RBP8.06□□□□□ -1.12
RTN1-208ENST00000557422 C9orf47Q6ZRZ4 202 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 C11orf52Q96A22 123 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 FXYD5Q96DB9 178 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
RTN1-208ENST00000557422 TRBV19A0A075B6N1 114 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 LOC100131303A0A0U1RQF7 123 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 NDUFB4O95168 129 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 HIST1H1EP10412 219 aaKnown RBP8.05□□□□□ -1.12
RTN1-208ENST00000557422 UBE2G2P60604 165 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 RHEBQ15382 184 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 TVP23CQ96ET8 276 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 PRELID1Q9Y255 219 aa8.05□□□□□ -1.12
RTN1-208ENST00000557422 IGKV2-40A0A087WW87 121 aaPredicted RBP8.04□□□□□ -1.12
RTN1-208ENST00000557422 ZNF727A8MUV8 499 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 B4DEV8 164 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 IGKV2D-40P01614 121 aaPredicted RBP8.04□□□□□ -1.12
RTN1-208ENST00000557422 NBEAP1P0C6P0 100 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 PDE6HQ13956 83 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 SH2D6Q7Z4S9 175 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 RASL10AQ92737 203 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 TM2D2Q9BX73 214 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
RTN1-208ENST00000557422 TRAV8-6A0A0B4J262 113 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 LECT2O14960 151 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 OR10J4P0C629 311 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 CEBPGP53567 150 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 TMEM241Q24JQ0 296 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 TMEM78Q5T7P6 136 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 EXOC3-AS1Q8N2X6 119 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 ARL6IP6Q8N6S5 226 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 NHLRC2Q8NBF2 726 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 HIST1H2BAQ96A08 127 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 SMIM7Q9BQ49 75 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 SPXQ9BT56 116 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
RTN1-208ENST00000557422 PARLQ9H300 379 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms