RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 DNLZQ5SXM8 178 aa14.92□□□□□ -0.02
FOXA1-205ENST00000557418 IBA57Q5T440 356 aaKnown RBP14.92□□□□□ -0.02
FOXA1-205ENST00000557418 DAZAP1Q96EP5 407 aaKnown RBP14.92□□□□□ -0.02
FOXA1-205ENST00000557418 TMSB15BA0A087X1C1 80 aa14.91□□□□□ -0.02
FOXA1-205ENST00000557418 LYRM9A8MSI8 78 aa14.91□□□□□ -0.02
FOXA1-205ENST00000557418 P01737 135 aa14.91□□□□□ -0.02
FOXA1-205ENST00000557418 NDUFA5Q16718 116 aa14.91□□□□□ -0.02
FOXA1-205ENST00000557418 GSN-AS1Q9NRJ2 163 aa14.91□□□□□ -0.02
FOXA1-205ENST00000557418 GRIFINA4D1Z8 144 aa14.9□□□□□ -0.02
FOXA1-205ENST00000557418 CXCL1P09341 107 aa14.9□□□□□ -0.02
FOXA1-205ENST00000557418 RNASE3P12724 160 aaKnown RBP14.9□□□□□ -0.02
FOXA1-205ENST00000557418 TCL1AP56279 114 aa14.9□□□□□ -0.02
FOXA1-205ENST00000557418 OSTCQ9NRP0 149 aa14.9□□□□□ -0.02
FOXA1-205ENST00000557418 CARHSP1Q9Y2V2 147 aaKnown RBP14.9□□□□□ -0.02
FOXA1-205ENST00000557418 DNAH10Q8IVF4 4471 aa14.9□□□□□ -0.02
FOXA1-205ENST00000557418 ERVFC1-1P60608 527 aa14.89□□□□□ -0.03
FOXA1-205ENST00000557418 ZNF415Q09FC8 603 aa14.89□□□□□ -0.03
FOXA1-205ENST00000557418 PNRC1Q12796 327 aaPredicted RBP14.89□□□□□ -0.03
FOXA1-205ENST00000557418 POM121L12Q8N7R1 296 aa14.89□□□□□ -0.03
FOXA1-205ENST00000557418 OR2D3Q8NGH3 330 aa14.89□□□□□ -0.03
FOXA1-205ENST00000557418 C9orf85Q96MD7 179 aa14.89□□□□□ -0.03
FOXA1-205ENST00000557418 RPP21Q9H633 154 aaKnown RBP14.89□□□□□ -0.03
FOXA1-205ENST00000557418 DEFB130BP0DP73 79 aa14.88□□□□□ -0.03
FOXA1-205ENST00000557418 DEFB130AP0DP74 79 aa14.88□□□□□ -0.03
FOXA1-205ENST00000557418 ASIPP42127 132 aa14.88□□□□□ -0.03
FOXA1-205ENST00000557418 DAZ2Q13117 558 aaKnown RBP14.88□□□□□ -0.03
FOXA1-205ENST00000557418 SFRP2Q96HF1 295 aa14.88□□□□□ -0.03
FOXA1-205ENST00000557418 DNAH6Q9C0G6 4158 aa14.88□□□□□ -0.03
FOXA1-205ENST00000557418 GATCO43716 136 aaKnown RBP14.87□□□□□ -0.03
FOXA1-205ENST00000557418 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
FOXA1-205ENST00000557418 TIMM8BQ9Y5J9 83 aaPredicted RBP14.87□□□□□ -0.03
FOXA1-205ENST00000557418 SNURFLB1AK76 121 aa14.86□□□□□ -0.03
FOXA1-205ENST00000557418 GZMBP10144 247 aa14.86□□□□□ -0.03
FOXA1-205ENST00000557418 NOP10Q9NPE3 64 aaKnown RBP14.86□□□□□ -0.03
FOXA1-205ENST00000557418 SCRT2Q9NQ03 307 aa14.86□□□□□ -0.03
FOXA1-205ENST00000557418 V9GYV3 84 aa14.86□□□□□ -0.03
FOXA1-205ENST00000557418 ARMS2P0C7Q2 107 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 CT83Q5H943 113 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 TMEM88Q6PEY1 159 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 LINC00612Q8N6U2 182 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 OR10G8Q8NGN5 311 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 SPXQ9BT56 116 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 IL36BQ9NZH7 164 aa14.85□□□□□ -0.03
FOXA1-205ENST00000557418 H3BVH4 76 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 SPINK4O60575 86 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 IGLC6P0CF74 106 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 MED14OSP0DP75 135 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 UBE2DNLQ8IWF7 75 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 C15orf54Q8N8G6 183 aa14.84□□□□□ -0.03
FOXA1-205ENST00000557418 SSBP4Q9BWG4 385 aaPredicted RBP14.84□□□□□ -0.03
FOXA1-205ENST00000557418 FRAS1Q86XX4 4008 aa14.83□□□□□ -0.04
FOXA1-205ENST00000557418 MUC4Q99102 2169 aa14.83□□□□□ -0.04
FOXA1-205ENST00000557418 SNAI2O43623 268 aa14.83□□□□□ -0.04
FOXA1-205ENST00000557418 S100A4P26447 101 aaKnown RBP14.83□□□□□ -0.04
FOXA1-205ENST00000557418 XKRY2A2RUG3 117 aa14.82□□□□□ -0.04
FOXA1-205ENST00000557418 F5H768 121 aa14.82□□□□□ -0.04
FOXA1-205ENST00000557418 Q6ZTI0 123 aa14.82□□□□□ -0.04
FOXA1-205ENST00000557418 GTSF1Q8WW33 167 aa14.82□□□□□ -0.04
FOXA1-205ENST00000557418 PTH2Q96A98 100 aa14.82□□□□□ -0.04
FOXA1-205ENST00000557418 A8MWL6 223 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 M0R2P5 195 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 ATP5G1P05496 136 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 LGALS9BQ3B8N2 356 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 RNF212Q495C1 297 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 FER1L6-AS1Q8NA97 138 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 C15orf53Q8NAA6 179 aa14.81□□□□□ -0.04
FOXA1-205ENST00000557418 MRPL16Q9NX20 251 aaKnown RBP14.81□□□□□ -0.04
FOXA1-205ENST00000557418 TSKUQ8WUA8 353 aa14.8□□□□□ -0.04
FOXA1-205ENST00000557418 RASL10AQ92737 203 aa14.8□□□□□ -0.04
FOXA1-205ENST00000557418 TRGV1A0A0A0MS02 117 aa14.79□□□□□ -0.04
FOXA1-205ENST00000557418 M0R2N4 97 aa14.79□□□□□ -0.04
FOXA1-205ENST00000557418 FOXA3P55318 350 aaPredicted RBP14.79□□□□□ -0.04
FOXA1-205ENST00000557418 CLRN3Q8NCR9 226 aa14.79□□□□□ -0.04
FOXA1-205ENST00000557418 OR10AG1Q8NH19 301 aa14.79□□□□□ -0.04
FOXA1-205ENST00000557418 A0A1W2PPQ1 181 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 PPP1R2P9O14990 202 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 NXPH4O95158 308 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 APOC3P02656 99 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 CTRLP40313 264 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 ANAPC16Q96DE5 110 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 GFRA4Q9GZZ7 299 aa14.78□□□□□ -0.04
FOXA1-205ENST00000557418 GAGE12BA1L429 117 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 FAM231BA6NCW3 169 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 GAGE7O76087 117 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 MT-ND4LP03901 98 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 GAGE12FP0CL80 117 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 GAGE12GP0CL81 117 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 GAGE12IP0CL82 117 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 DMRTA1Q5VZB9 504 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 LYZL1Q6UWQ5 148 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 C18orf15Q96N68 181 aa14.77□□□□□ -0.05
FOXA1-205ENST00000557418 MUC21A0A0G2JKD1 596 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 MUC21A0A140T8X8 626 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 SMIM27A0A1W2PRY6 76 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 ZNF876PQ49A33 203 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 PIK3CD-AS1Q5SR53 167 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 CNFNQ9BYD5 112 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 PHLDA3Q9Y5J5 127 aa14.76□□□□□ -0.05
FOXA1-205ENST00000557418 IGLV2-18A0A075B6J9 118 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms