RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DYNC2LI1Q8TCX1 351 aa7.63□□□□□ -1.19
PSEN1-220ENST00000557037 SMIM4Q8WVI0 70 aa7.63□□□□□ -1.19
PSEN1-220ENST00000557037 GGACTQ9BVM4 153 aa7.63□□□□□ -1.19
PSEN1-220ENST00000557037 JPT2Q9H910 190 aa7.63□□□□□ -1.19
PSEN1-220ENST00000557037 C11orf21Q9P2W6 132 aa7.63□□□□□ -1.19
PSEN1-220ENST00000557037 SCGB1D2O95969 90 aa7.62□□□□□ -1.19
PSEN1-220ENST00000557037 IFNA7P01567 189 aa7.62□□□□□ -1.19
PSEN1-220ENST00000557037 VBP1P61758 197 aa7.62□□□□□ -1.19
PSEN1-220ENST00000557037 RANP62826 216 aaKnown RBP7.62□□□□□ -1.19
PSEN1-220ENST00000557037 FAM167A-AS1Q96KT0 104 aa7.62□□□□□ -1.19
PSEN1-220ENST00000557037 RAB26Q9ULW5 256 aa7.62□□□□□ -1.19
PSEN1-220ENST00000557037 FAM24AA6NFZ4 105 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 KRTAP9-7A8MTY7 169 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
PSEN1-220ENST00000557037 SFT2D2O95562 160 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 PPP1R1AQ13522 171 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 MIR17HGQ75NE6 70 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 PTH2Q96A98 100 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 FXYD5Q96DB9 178 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 TVP23CQ96ET8 276 aa7.61□□□□□ -1.19
PSEN1-220ENST00000557037 ANKRD20A5PA0PJZ0 165 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 A8MWV9 139 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 RPL29P47914 159 aaKnown RBP7.6□□□□□ -1.19
PSEN1-220ENST00000557037 MRPS10P82664 201 aaKnown RBP7.6□□□□□ -1.19
PSEN1-220ENST00000557037 UFSP1Q6NVU6 142 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 HYLS1Q96M11 299 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 BCL7BQ9BQE9 202 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 CHCHD5Q9BSY4 110 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 VCX3BQ9H321 246 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 TREM1Q9NP99 234 aa7.6□□□□□ -1.19
PSEN1-220ENST00000557037 A0A096LNI7 61 aa7.59□□□□□ -1.19
PSEN1-220ENST00000557037 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
PSEN1-220ENST00000557037 RAB5CP51148 216 aa7.59□□□□□ -1.19
PSEN1-220ENST00000557037 MIXL1Q9H2W2 232 aa7.59□□□□□ -1.19
PSEN1-220ENST00000557037 PRR34Q9NV39 138 aa7.59□□□□□ -1.19
PSEN1-220ENST00000557037 WDR83OSQ9Y284 106 aa7.59□□□□□ -1.19
PSEN1-220ENST00000557037 TRBV6-8A0A0A6YYG3 113 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 UBE2D3P61077 147 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 UBE2D2P62837 147 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
PSEN1-220ENST00000557037 BAXQ07812 192 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 INO80EQ8NBZ0 244 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-220ENST00000557037 TMED6Q8WW62 240 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 AP3S1Q92572 193 aa7.58□□□□□ -1.2
PSEN1-220ENST00000557037 RABL2AQ9UBK7 228 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-220ENST00000557037 CST7O76096 145 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 PTTG1O95997 202 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-220ENST00000557037 TAS2R30P59541 319 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 FAM74A4Q5TZK3 123 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 NMES1Q9C002 83 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
PSEN1-220ENST00000557037 C7orf66A4D0T2 115 aa7.56□□□□□ -1.2
PSEN1-220ENST00000557037 RPS10P46783 165 aaKnown RBP7.56□□□□□ -1.2
PSEN1-220ENST00000557037 RBX1P62877 108 aa7.56□□□□□ -1.2
PSEN1-220ENST00000557037 GOLT1AQ6ZVE7 132 aa7.56□□□□□ -1.2
PSEN1-220ENST00000557037 GFRA4Q9GZZ7 299 aa7.56□□□□□ -1.2
PSEN1-220ENST00000557037 FGF7P21781 194 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 LINC01547P58512 204 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-220ENST00000557037 S100A10P60903 97 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 RPL36AP83881 106 aaKnown RBP7.55□□□□□ -1.2
PSEN1-220ENST00000557037 GAGE6Q13070 117 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 IL18Q14116 193 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 MCFD2Q8NI22 146 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 RPL36ALQ969Q0 106 aaKnown RBP7.55□□□□□ -1.2
PSEN1-220ENST00000557037 SGK494Q96LW2 274 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 GSKIPQ9P0R6 139 aa7.55□□□□□ -1.2
PSEN1-220ENST00000557037 RGS5O15539 181 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 OR7C2O60412 319 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 TSPAN13O95857 204 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 BCAP31P51572 246 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 DIRAS2Q96HU8 199 aa7.54□□□□□ -1.2
PSEN1-220ENST00000557037 SLIRPQ9GZT3 109 aaKnown RBP7.54□□□□□ -1.2
PSEN1-220ENST00000557037 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 RHODO00212 210 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 CTDSP2O14595 271 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 LCE2BO14633 110 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-220ENST00000557037 REG3AQ06141 175 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 IAH1Q2TAA2 248 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-220ENST00000557037 C15orf56Q8N910 161 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 FUNDC2Q9BWH2 189 aa7.53□□□□□ -1.2
PSEN1-220ENST00000557037 L7N2F9 121 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 GCGP01275 180 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 MT-ND6P03923 174 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
PSEN1-220ENST00000557037 PKIAP61925 76 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 VAMP2P63027 116 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 UBE2L3P68036 154 aaKnown RBP7.52□□□□□ -1.21
PSEN1-220ENST00000557037 CMTM2Q8TAZ6 248 aa7.52□□□□□ -1.21
PSEN1-220ENST00000557037 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 GNG5P63218 68 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 C1orf137Q5JT78 98 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 SPANXN2Q5MJ10 180 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
PSEN1-220ENST00000557037 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms