RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 DEFB4AO15263 64 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 GZMBP10144 247 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
TMEM260-213ENST00000556929 RHEBQ15382 184 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 FER1L6-AS1Q8NA97 138 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 BORCS7Q96B45 105 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 NOP10Q9NPE3 64 aaKnown RBP6.98□□□□□ -1.29
TMEM260-213ENST00000556929 PHLDA3Q9Y5J5 127 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 U3KQK5 164 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 MEGF8Q7Z7M0 2845 aa6.98□□□□□ -1.29
TMEM260-213ENST00000556929 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
TMEM260-213ENST00000556929 PLAC8L1A1L4L8 177 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 CXorf65A6NEN9 183 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 M0R2P5 195 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 SNAI2O43623 268 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 SPINK4O60575 86 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 LGALS9BQ3B8N2 356 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 FAM222AQ5U5X8 452 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 TPPP3Q9BW30 176 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
TMEM260-213ENST00000556929 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
TMEM260-213ENST00000556929 A0A087WWC5 75 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 C7orf77A4D0Y5 90 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
TMEM260-213ENST00000556929 CACNG7P62955 275 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 ZFP82Q8N141 532 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 PTH2Q96A98 100 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 NDUFAF3Q9BU61 184 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
TMEM260-213ENST00000556929 MUC4Q99102 2169 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 M0R381 172 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GAGE7O76087 117 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 DAD1P61803 113 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 KCNIP4Q6PIL6 250 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 RASL10AQ92737 203 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
TMEM260-213ENST00000556929 MRPL16Q9NX20 251 aaKnown RBP6.95□□□□□ -1.3
TMEM260-213ENST00000556929 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 A8MWV9 139 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 DEFB130BP0DP73 79 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 DEFB130AP0DP74 79 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 S100A1P23297 94 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 S100PP25815 95 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 CTRLP40313 264 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 XP32Q5T750 250 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 Q6ZTI0 123 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
TMEM260-213ENST00000556929 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 CIDEAO60543 219 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 NTF3P20783 257 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 SSTP61278 116 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 RIGQ13278 110 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 TWIST1Q15672 202 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 SMIM15Q7Z3B0 74 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 LINC00612Q8N6U2 182 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 EDA2RQ9HAV5 297 aa6.93□□□□□ -1.3
TMEM260-213ENST00000556929 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
TMEM260-213ENST00000556929 TRAV4A0A0B4J268 109 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 MUC21A0A0G2JKD1 596 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 MUC21A0A140T8X8 626 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 ATP6V1G1O75348 118 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 NXPH4O95158 308 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 ATP5G1P05496 136 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 SMIM17P0DL12 118 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
TMEM260-213ENST00000556929 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 AP1S3Q96PC3 154 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms