RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 PHB2Q99623 299 aa-2.2□□□□□ -2.76
LINC00648-203ENST00000556923 LRTM1Q9HBL6 345 aa-2.2□□□□□ -2.76
LINC00648-203ENST00000556923 NBEAL2Q6ZNJ1 2754 aa-2.2□□□□□ -2.76
LINC00648-203ENST00000556923 DLC1Q96QB1 1528 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 TRAV12-2A0A075B6T6 113 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 FABP2P12104 132 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 BORCS8Q96FH0 119 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 PRELID3AQ96N28 172 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 BET1LQ9NYM9 111 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 TRAPPC8Q9Y2L5 1435 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 VPS13DQ5THJ4 4388 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 CAMSAP1Q5T5Y3 1602 aa-2.21□□□□□ -2.76
LINC00648-203ENST00000556923 ANKRD11Q6UB99 2663 aaPredicted RBP-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 TEX49A0A1B0GTD5 131 aa-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 IFNA6P05013 189 aa-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 SDC4P31431 198 aa-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 WFDC2Q14508 124 aa-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 PPP1R1CQ8WVI7 109 aa-2.22□□□□□ -2.76
LINC00648-203ENST00000556923 CSPG4Q6UVK1 2322 aa-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 ATG12O94817 140 aa-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 SS18L2Q9UHA2 77 aa-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 DOCK11Q5JSL3 2073 aa-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 MYH1P12882 1939 aa-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 ANK3Q12955 4377 aaKnown RBP-2.23□□□□□ -2.77
LINC00648-203ENST00000556923 NUP210Q8TEM1 1887 aaPredicted RBP-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 SPTBN1Q01082 2364 aaKnown RBP-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 LOC107986453A0A1B0GWG9 222 aa-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 CROCCP2Q86T23 111 aa-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 DGCR14Q96DF8 476 aaKnown RBP-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 SMIM7Q9BQ49 75 aa-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 C2CD3Q4AC94 2353 aa-2.24□□□□□ -2.77
LINC00648-203ENST00000556923 TEX15Q9BXT5 2789 aa-2.25□□□□□ -2.77
LINC00648-203ENST00000556923 TRBV10-1A0A0K0K1A3 114 aa-2.25□□□□□ -2.77
LINC00648-203ENST00000556923 APODP05090 189 aa-2.25□□□□□ -2.77
LINC00648-203ENST00000556923 LTC4SQ16873 150 aa-2.25□□□□□ -2.77
LINC00648-203ENST00000556923 LRP5O75197 1615 aa-2.25□□□□□ -2.77
LINC00648-203ENST00000556923 CTXN2P0C2S0 81 aa-2.26□□□□□ -2.77
LINC00648-203ENST00000556923 UNQ5815/PRO19632Q6UWF5 114 aa-2.26□□□□□ -2.77
LINC00648-203ENST00000556923 TCOF1Q13428 1488 aaKnown RBP-2.26□□□□□ -2.77
LINC00648-203ENST00000556923 MYH9P35579 1960 aaKnown RBP-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 HTTP42858 3142 aa-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 TRAV17A0A0B4J275 112 aa-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 SLC25A4P12235 298 aa-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 SPRR2FQ96RM1 72 aa-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 MYH3P11055 1940 aa-2.27□□□□□ -2.77
LINC00648-203ENST00000556923 PPRC1Q5VV67 1664 aaKnown RBP-2.28□□□□□ -2.77
LINC00648-203ENST00000556923 M0R3E3 92 aa-2.28□□□□□ -2.77
LINC00648-203ENST00000556923 RPL19P84098 196 aaKnown RBP-2.28□□□□□ -2.77
LINC00648-203ENST00000556923 SPAG11BQ08648 103 aa-2.28□□□□□ -2.77
LINC00648-203ENST00000556923 PKD1P98161 4303 aa-2.28□□□□□ -2.78
LINC00648-203ENST00000556923 ZNF670-ZNF695F2Z2N8 137 aa-2.29□□□□□ -2.78
LINC00648-203ENST00000556923 ARF6P62330 175 aa-2.29□□□□□ -2.78
LINC00648-203ENST00000556923 AP3S1Q92572 193 aa-2.29□□□□□ -2.78
LINC00648-203ENST00000556923 SPTA1P02549 2419 aa-2.29□□□□□ -2.78
LINC00648-203ENST00000556923 KIDINS220Q9ULH0 1771 aa-2.3□□□□□ -2.78
LINC00648-203ENST00000556923 MFSD11O43934 449 aa-2.3□□□□□ -2.78
LINC00648-203ENST00000556923 OR2H2O95918 312 aa-2.3□□□□□ -2.78
LINC00648-203ENST00000556923 ITPR1Q14643 2758 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 TECPR2O15040 1411 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 A0A087WTM6 91 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 BLCAPP62952 87 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 GINS3Q9BRX5 216 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 TMEM242Q9NWH2 141 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 LAMTOR3Q9UHA4 124 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 NUBP2Q9Y5Y2 271 aa-2.31□□□□□ -2.78
LINC00648-203ENST00000556923 PTPRGP23470 1445 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 FAM135BQ49AJ0 1406 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 TRBV27A0A0K0K1C4 114 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 TRDV1A0A1B0GX56 115 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 APOC1P02654 83 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 Q5VSD8 79 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 SSBP3-AS1Q7Z2R9 100 aa-2.32□□□□□ -2.78
LINC00648-203ENST00000556923 ZNF815PA8K554 130 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 GABARAPH6UMI1 98 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 SDC2P34741 201 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 POLR2JP52435 117 aaKnown RBP-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 DHRS4L2Q6PKH6 230 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 OR51A4Q8NGJ6 313 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 OR13C6PQ8NH95 151 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 Q96NJ1 140 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 PRO0255Q9UI72 69 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 AKAP11Q9UKA4 1901 aa-2.33□□□□□ -2.78
LINC00648-203ENST00000556923 TAS2R41P59536 307 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 TEX29Q8N6K0 151 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 MORN4Q8NDC4 146 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 PARVGQ9HBI0 331 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 MED11Q9P086 117 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 CUBNO60494 3623 aa-2.34□□□□□ -2.78
LINC00648-203ENST00000556923 PRKDCP78527 4128 aaKnown RBP-2.35□□□□□ -2.78
LINC00648-203ENST00000556923 DYNC1H1Q14204 4646 aaKnown RBP-2.35□□□□□ -2.78
LINC00648-203ENST00000556923 PLXNA1Q9UIW2 1896 aa-2.35□□□□□ -2.78
LINC00648-203ENST00000556923 MTORP42345 2549 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 MGAM2Q2M2H8 2515 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 RBAKDNA6NC62 111 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 TFF1P04155 84 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 COX4I1P13073 169 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 ADCYAP1P18509 176 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 Q6ZRX8 168 aa-2.35□□□□□ -2.79
LINC00648-203ENST00000556923 PLXNA2O75051 1894 aa-2.36□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms