RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 PSCAO43653 123 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 CIDEAO60543 219 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 CRYGDP07320 174 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 GATA1P15976 413 aaPredicted RBP4.88□□□□□ -1.63
PCNX1-213ENST00000556846 S100A4P26447 101 aaKnown RBP4.88□□□□□ -1.63
PCNX1-213ENST00000556846 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCNX1-213ENST00000556846 ZNF80P51504 273 aaPredicted RBP4.88□□□□□ -1.63
PCNX1-213ENST00000556846 OR10J3Q5JRS4 329 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 RPL7L1Q6DKI1 246 aaKnown RBP4.88□□□□□ -1.63
PCNX1-213ENST00000556846 C10orf126Q8N4M7 172 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 CYB561D1Q8N8Q1 229 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 SCRT2Q9NQ03 307 aa4.88□□□□□ -1.63
PCNX1-213ENST00000556846 A0A087WTM6 91 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-38A0A0C4DH36 116 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 TRBV6-4A0A1B0GX49 114 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 A0A1W2PRE2 83 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 FABP5P3A8MUU1 101 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 RS1O15537 224 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 DNAH10OSP0CZ25 163 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 UBE2G2P60604 165 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 RHOHQ15669 191 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 LGALSLQ3ZCW2 172 aaPredicted RBP4.87□□□□□ -1.63
PCNX1-213ENST00000556846 AKR1C8PQ5T2L2 129 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 CFAP126Q5VTH2 177 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
PCNX1-213ENST00000556846 Q8N1X5 172 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 SLC25A29Q8N8R3 303 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 TMEM75Q8N9X5 138 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 SUN5Q8TC36 379 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 HERC2O95714 4834 aa4.87□□□□□ -1.63
PCNX1-213ENST00000556846 CTXND1A0A1B0GTU2 59 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 GGTLC3B5MD39 225 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 IGLV2-11P01706 119 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-30P01768 117 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-33P01772 117 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-30-3P0DP02 117 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-30-5P0DP03 117 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 ASIPP42127 132 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 C9orf85Q96MD7 179 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 NKX6-2Q9C056 277 aaPredicted RBP4.86□□□□□ -1.63
PCNX1-213ENST00000556846 Q9HAA7 133 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
PCNX1-213ENST00000556846 RNF222A6NCQ9 220 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GAGE12JA6NER3 117 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 A8MWV9 139 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 EPM2AB3EWF7 344 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 ARPC5O15511 151 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 MGST1P10620 155 aaKnown RBP4.85□□□□□ -1.63
PCNX1-213ENST00000556846 FGF8P55075 233 aaPredicted RBP4.85□□□□□ -1.63
PCNX1-213ENST00000556846 TIRAPP58753 221 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 UBE2G1P62253 170 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GAGE1Q13065 139 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GAGE4Q13068 117 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GAGE5Q13069 117 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 RGS21Q2M5E4 152 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GAGE13Q4V321 117 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 CST9LP1Q5W188 147 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 DPPA3Q6W0C5 159 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 SYT8Q8NBV8 401 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 STOML3Q8TAV4 291 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 HIST1H2BAQ96A08 127 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 GTSF1LQ9H1H1 148 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 ARL2-SNX15V9GYD0 113 aa4.85□□□□□ -1.63
PCNX1-213ENST00000556846 IGLV5-52A0A0A0MRZ9 124 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 IGKV3D-20A0A0C4DH25 116 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 GRIFINA4D1Z8 144 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 FAM74A7A6NL05 159 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 IBA57-AS1B1ANH7 110 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 B4DEV8 164 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 M0R036 132 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 PEX7O00628 323 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 RNASE3P12724 160 aaKnown RBP4.84□□□□□ -1.63
PCNX1-213ENST00000556846 GCSHP23434 173 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 ZNF726P1Q15940 193 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 LELP1Q5T871 98 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 PTH2Q96A98 100 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 ZFP30Q9Y2G7 519 aa4.84□□□□□ -1.63
PCNX1-213ENST00000556846 TMSB15BA0A087X1C1 80 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 H3BVH4 76 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 ARMS2P0C7Q2 107 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 TPT1P13693 172 aaKnown RBP4.83□□□□□ -1.64
PCNX1-213ENST00000556846 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 ZFP2Q6ZN57 461 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 Q6ZSN1 163 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 Q86TA4 180 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 FMC1Q96HJ9 113 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 MAP1LC3BQ9GZQ8 125 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 PARLQ9H300 379 aa4.83□□□□□ -1.64
PCNX1-213ENST00000556846 JPT2Q9H910 190 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms