RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 SRRM4A7MD48 611 aaKnown RBP1.36□□□□□ -2.19
KTN1-224ENST00000556631 IGHV3-23P01764 117 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 COX8AP10176 69 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 CLTCL1P53675 1640 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 DSCR4P56555 118 aaPredicted RBP1.36□□□□□ -2.19
KTN1-224ENST00000556631 ARHGAP5Q13017 1502 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 CSRP2Q16527 193 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 Q6ZR03 302 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 DIRC1Q969H9 104 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 VPS13AQ96RL7 3174 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 C8orf17Q9NRJ1 99 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 C19orf73Q9NVV2 129 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 C11orf21Q9P2W6 132 aa1.36□□□□□ -2.19
KTN1-224ENST00000556631 GCC2Q8IWJ2 1684 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV1-27A0A075B6S5 117 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV2-40A0A087WW87 121 aaPredicted RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 F8WEM9 126 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV2D-40P01614 121 aaPredicted RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 ARL14EPLP0DKL9 152 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 PRR3P79522 188 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 ALKAL1Q6UXT8 129 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 ZFAND2AQ8N6M9 145 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 DMDP11532 3685 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 CPSF1Q10570 1443 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 ADAMTS13Q76LX8 1427 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 CCL16O15467 120 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 CPSF4O95639 269 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV3-11P04433 115 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 LINC00313P59037 77 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 FAM120AOSQ5T036 256 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 Q6ZTC4 211 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 COL14A1Q05707 1796 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 KIAA1551Q9HCM1 1747 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 C5P01031 1676 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 SPTBN5Q9NRC6 3674 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 FER1L5A0AVI2 2057 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 SCN10AQ9Y5Y9 1956 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 NUP153P49790 1475 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 ANKRD50Q9ULJ7 1429 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV1D-42A0A075B6H8 117 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 TRBV7-3A0A075B6L6 115 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV3D-11A0A0A0MRZ8 115 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGKV6-21A0A0C4DH24 114 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 RPL36A-HNRNPH2H7BZ11 118 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 UQCR11O14957 56 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 MED14OSP0DP75 135 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 Q0VFX4 171 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 Q6ZRP5 223 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 LINC01555Q8NAE3 123 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 SMCR5Q8TEV8 140 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 DCANP1Q8TF63 244 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 KLK5Q9Y337 293 aaPredicted RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 DICER1Q9UPY3 1922 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 BRCA1P38398 1863 aaKnown RBP1.35□□□□□ -2.19
KTN1-224ENST00000556631 ADAMTSL1Q8N6G6 1762 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGLV10-54A0A075B6I4 117 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 IGLV3-12A0A075B6K2 115 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 A0A087WWV3 80 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 WISP2O76076 250 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 LMO4P61968 165 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 KRTAP19-4Q3LI73 84 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 C2orf83Q53S99 150 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 NDUFA11Q86Y39 141 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 C20orf78Q9BR46 151 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 LENEPQ9Y5L5 61 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 SBF2Q86WG5 1849 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 MYO5BQ9ULV0 1848 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 NRXN1Q9ULB1 1477 aa1.35□□□□□ -2.19
KTN1-224ENST00000556631 SPENQ96T58 3664 aaKnown RBP1.34□□□□□ -2.19
KTN1-224ENST00000556631 MYO18AQ92614 2054 aaKnown RBP1.34□□□□□ -2.19
KTN1-224ENST00000556631 TRGV2A0A075B6R0 118 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 ZNF71Q9NQZ8 489 aaPredicted RBP1.34□□□□□ -2.19
KTN1-224ENST00000556631 CMC2Q9NRP2 79 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 HIGD1BQ9P298 99 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 SMCHD1A6NHR9 2005 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 PPLO60437 1756 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 MTCL1Q9Y4B5 1905 aaKnown RBP1.34□□□□□ -2.19
KTN1-224ENST00000556631 E7EQL1 145 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 ARMS2P0C7Q2 107 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 WFDC2Q14508 124 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 C17orf58Q2M2W7 97 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 Q6JHZ5 121 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 C7orf33Q8WU49 177 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 DPH3P1Q9H4G8 78 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 KLK12Q9UKR0 248 aa1.34□□□□□ -2.19
KTN1-224ENST00000556631 FRMPD3Q5JV73 1810 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.2
KTN1-224ENST00000556631 IGHV3-33P01772 117 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 RNASE3P12724 160 aaKnown RBP1.34□□□□□ -2.2
KTN1-224ENST00000556631 COL8A2P25067 703 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 RNASE13Q5GAN3 156 aaKnown RBP1.34□□□□□ -2.2
KTN1-224ENST00000556631 RPP21Q9H633 154 aaKnown RBP1.34□□□□□ -2.2
KTN1-224ENST00000556631 TP73-AS1Q9UF72 201 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 CUL9Q8IWT3 2517 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 TRBV7-7A0A0K0K1E9 115 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 TMEM14DPA8MWL7 114 aa1.34□□□□□ -2.2
KTN1-224ENST00000556631 K7EQG2 157 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms