RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 K7EMI3 77 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 CCL25O15444 150 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 DPM2O94777 84 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
GPHN-213ENST00000556501 COX6B1P14854 86 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 S100A4P26447 101 aaKnown RBP4.05□□□□□ -1.76
GPHN-213ENST00000556501 RNASE4P34096 147 aaKnown RBP4.05□□□□□ -1.76
GPHN-213ENST00000556501 RPL32P62910 135 aaKnown RBP4.05□□□□□ -1.76
GPHN-213ENST00000556501 ORMDL2Q53FV1 153 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 ADAMTSL5Q6ZMM2 481 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 WFDC3Q8IUB2 231 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 POM121L12Q8N7R1 296 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 MYOZ3Q8TDC0 251 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 NRGNQ92686 78 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 RASL10AQ92737 203 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 FOXC2Q99958 501 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 VPREB3Q9UKI3 123 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 CR1P17927 2039 aa4.05□□□□□ -1.76
GPHN-213ENST00000556501 SPG11Q96JI7 2443 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 A0A087WX48 190 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 TRAV12-1A0A0B4J245 112 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 A6NDN8 102 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 LGALS9O00182 355 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 PPP1R17O96001 155 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 IGKCP01834 107 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 PRSS1P07477 247 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 ELANEP08246 267 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 LGALS1P09382 135 aaKnown RBP4.04□□□□□ -1.76
GPHN-213ENST00000556501 EDN2P20800 178 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 PTTG1IPP53801 180 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 SUMO2P61956 95 aaKnown RBP4.04□□□□□ -1.76
GPHN-213ENST00000556501 SRSF1Q07955 248 aaKnown RBP eCLIP4.04□□□□□ -1.76
GPHN-213ENST00000556501 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 RNF152Q8N8N0 203 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 JMJD8Q96S16 334 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 ZNF702PQ9H963 129 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 HHLA3Q9XRX5 114 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 KIF25-AS1Q9Y6Z4 181 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 RELNP78509 3460 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 PRRC2AP48634 2157 aaKnown RBP4.04□□□□□ -1.76
GPHN-213ENST00000556501 ABCA12Q86UK0 2595 aa4.04□□□□□ -1.76
GPHN-213ENST00000556501 IGKV3-7A0A075B6H7 116 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 IGHV4OR15-8A0A075B7B6 117 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 A0A087WW49 117 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 IGKV2D-26A0A0A0MRZ7 120 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 A0A0J9YX75 114 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 C7orf71A4D174 169 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 CBY3A6NI87 242 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.03□□□□□ -1.76
GPHN-213ENST00000556501 K7EQG2 157 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 GNRH2O43555 120 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 MGPP08493 103 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 IGHV4-31P0DP07 118 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 FOSL1P15407 271 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 PLNP26678 52 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 NMUP48645 174 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 LINC00315P59091 139 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 VAMP3Q15836 100 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 C10orf99Q6UWK7 81 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 C14orf178Q8N769 122 aaPredicted RBP4.03□□□□□ -1.76
GPHN-213ENST00000556501 TOMM6Q96B49 74 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 RPL39LQ96EH5 51 aaKnown RBP4.03□□□□□ -1.76
GPHN-213ENST00000556501 C9orf85Q96MD7 179 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 BEX4Q9NWD9 120 aaPredicted RBP4.03□□□□□ -1.76
GPHN-213ENST00000556501 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
GPHN-213ENST00000556501 DOPEY2Q9Y3R5 2298 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 MUC4Q99102 2169 aa4.03□□□□□ -1.76
GPHN-213ENST00000556501 FASNP49327 2511 aaKnown RBP4.02□□□□□ -1.77
GPHN-213ENST00000556501 CRYBG3Q68DQ2 2970 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
GPHN-213ENST00000556501 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 LINC01549A6NIU2 74 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 F8VRH5 84 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 H3BRM9 83 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 H7C1H1 209 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 K7EP13 123 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 SPRY2O43597 315 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 TGFAP01135 160 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 ZNF688P0C7X2 276 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 SRD5A1P18405 259 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 TCTAP57738 103 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 SNRPD3P62318 126 aaKnown RBP4.02□□□□□ -1.77
GPHN-213ENST00000556501 ZC2HC1BQ5TFG8 222 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 FAM159AQ6UWV7 190 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 Q6YL49 198 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 LRRC75A-AS1Q8N1F1 130 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 Q8N2B8 174 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 OR4C5Q8NGB2 326 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 UBE2E2Q96LR5 201 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 SCGB3A1Q96QR1 104 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 CHAC1Q9BUX1 264 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 CSPG4Q6UVK1 2322 aa4.02□□□□□ -1.77
GPHN-213ENST00000556501 CREBBPQ92793 2442 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 A8MTW9 85 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms