RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IGHV3-11P01762 117 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 IGHG2P01859 326 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 MGPP08493 103 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 TM4SF20Q53R12 229 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 UFSP1Q6NVU6 142 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 SCGB3A1Q96QR1 104 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 JMJD8Q96S16 334 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 SPCS1Q9Y6A9 102 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 EPG5Q9HCE0 2579 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 IGHV4-61A0A0C4DH41 118 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 F8VRH5 84 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 SOCS3O14543 225 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 ID1P41134 155 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 ANXA2RQ3ZCQ2 193 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 Q6ZQT7 251 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 NAA38Q9BRA0 125 aaKnown RBP5.3□□□□□ -1.56
TDP1-213ENST00000555880 RHPN1-AS1Q9BWJ2 59 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 DAZ1Q9NQZ3 744 aaKnown RBP5.3□□□□□ -1.56
TDP1-213ENST00000555880 A6NDX4 124 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 OR11H12B2RN74 326 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 IGHV4-38-2P0DP08 117 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 TAL2Q16559 108 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 GPHB5Q86YW7 130 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 CEND1Q8N111 149 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 C14orf178Q8N769 122 aaPredicted RBP5.3□□□□□ -1.56
TDP1-213ENST00000555880 OR11H1Q8NG94 326 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 OR11H2Q8NH07 326 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 C10orf105Q8TEF2 133 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 RASL10AQ92737 203 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 TM2D2Q9BX73 214 aa5.3□□□□□ -1.56
TDP1-213ENST00000555880 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
TDP1-213ENST00000555880 IGKV3-7A0A075B6H7 116 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 FXYD2P54710 66 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 ATP5J2P56134 94 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 FAM159AQ6UWV7 190 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 FAM19A4Q96LR4 140 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 HIST1H4GQ99525 98 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 TTTY13Q9BZ97 58 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 KLK15Q9H2R5 256 aa5.29□□□□□ -1.56
TDP1-213ENST00000555880 NHP2Q9NX24 153 aaKnown RBP5.29□□□□□ -1.56
TDP1-213ENST00000555880 CSMD1Q96PZ7 3565 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 LINC01549A6NIU2 74 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 MSMBP08118 114 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 C2orf66Q6UXQ4 117 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 APRG1Q8IVJ8 170 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 RPL39LQ96EH5 51 aaKnown RBP5.28□□□□□ -1.56
TDP1-213ENST00000555880 USP24Q9UPU5 2620 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 F6UB75 175 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 K7EMT4 169 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 BLCAPP62952 87 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 COTL1Q14019 142 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 CSTL1Q9H114 145 aa5.28□□□□□ -1.56
TDP1-213ENST00000555880 MYMXA0A1B0GTQ4 84 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 K7ERJ3 54 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 GNRH2O43555 120 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 NXPH4O95158 308 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 PRB1P04280 392 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 DEFB1P60022 68 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 CYSLTR1Q9Y271 337 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 MAP1AP78559 2803 aaPredicted RBP5.27□□□□□ -1.57
TDP1-213ENST00000555880 PKD1L2Q7Z442 2459 aa5.27□□□□□ -1.57
TDP1-213ENST00000555880 KLLNB2CW77 178 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 B4DSR2 109 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 LINC01619G3V211 115 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 SPRY2O43597 315 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 RNASE3P12724 160 aaKnown RBP5.26□□□□□ -1.57
TDP1-213ENST00000555880 COX6B1P14854 86 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 GATA3P23771 443 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 SNRPD3P62318 126 aaKnown RBP5.26□□□□□ -1.57
TDP1-213ENST00000555880 RPL32P62910 135 aaKnown RBP5.26□□□□□ -1.57
TDP1-213ENST00000555880 TMEM95Q3KNT9 176 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 PAPPA-AS1Q5QFB9 102 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 LCNL1Q6ZST4 164 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 MAPKAPK5-AS1Q8N8E1 139 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 BAALCQ8WXS3 180 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 KIR2DL4Q99706 377 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 ZNF580Q9UK33 172 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 SPG11Q96JI7 2443 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.26□□□□□ -1.572e-9■■■■■ 31.2
TDP1-213ENST00000555880 IGHV4-30-2A0A087WSY4 118 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 F5H697 171 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 CD7P09564 240 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 SRD5A1P18405 259 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 HERVK_113P61574 105 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 SYT8Q8NBV8 401 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 ZNF479Q96JC4 524 aa5.26□□□□□ -1.57
TDP1-213ENST00000555880 FLNCQ14315 2725 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 IGHV4OR15-8A0A075B7B6 117 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 A0A087WW49 117 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 TRAV12-3A0A0B4J271 114 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 PRSS29PA6NIE9 313 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 E9PLD3 99 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 G3V4G9 280 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 VCYO14598 125 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 SAP30O75446 220 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms