RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 LGALSLQ3ZCW2 172 aaPredicted RBP10.46□□□□□ -0.73
SNX6-205ENST00000555648 ZNF506Q5JVG8 444 aa10.46□□□□□ -0.73
SNX6-205ENST00000555648 Q8N1X5 172 aa10.46□□□□□ -0.73
SNX6-205ENST00000555648 ARL2-SNX15V9GYD0 113 aa10.46□□□□□ -0.73
SNX6-205ENST00000555648 PKD1P98161 4303 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 PGPEP1LA6NFU8 196 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
SNX6-205ENST00000555648 RGS21Q2M5E4 152 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 STOML3Q8TAV4 291 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 PTH2Q96A98 100 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 LINC00479Q96M42 142 aa10.45□□□□□ -0.74
SNX6-205ENST00000555648 A8MWV9 139 aa10.44□□□□□ -0.74
SNX6-205ENST00000555648 ARPC5O15511 151 aa10.44□□□□□ -0.74
SNX6-205ENST00000555648 RNASE3P12724 160 aaKnown RBP10.44□□□□□ -0.74
SNX6-205ENST00000555648 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
SNX6-205ENST00000555648 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
SNX6-205ENST00000555648 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
SNX6-205ENST00000555648 DYNC1H1Q14204 4646 aaKnown RBP10.44□□□□□ -0.74
SNX6-205ENST00000555648 MAP1LC3B2A6NCE7 125 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 B4DEV8 164 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNX6-205ENST00000555648 UBE2G1P62253 170 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 LELP1Q5T871 98 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 MAP1LC3BQ9GZQ8 125 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
SNX6-205ENST00000555648 IGKV3D-20A0A0C4DH25 116 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 FAM74A7A6NL05 159 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 CST9LP1Q5W188 147 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 Q86TA4 180 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 Q9HAA7 133 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 ZFP30Q9Y2G7 519 aa10.42□□□□□ -0.74
SNX6-205ENST00000555648 PIK3CD-AS1Q5SR53 167 aa10.41□□□□□ -0.74
SNX6-205ENST00000555648 ZFP2Q6ZN57 461 aa10.41□□□□□ -0.74
SNX6-205ENST00000555648 FMC1Q96HJ9 113 aa10.41□□□□□ -0.74
SNX6-205ENST00000555648 PARLQ9H300 379 aa10.41□□□□□ -0.74
SNX6-205ENST00000555648 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 IBA57-AS1B1ANH7 110 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 H3BVH4 76 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 M0R036 132 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 GAGE1Q13065 139 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 GAGE4Q13068 117 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 GAGE5Q13069 117 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 GAGE13Q4V321 117 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 IL36BQ9NZH7 164 aa10.4□□□□□ -0.74
SNX6-205ENST00000555648 EPM2AB3EWF7 344 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 RHODO00212 210 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 GCSHP23434 173 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 AKR1C3P42330 323 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
SNX6-205ENST00000555648 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 SH2D1AO60880 128 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 ARMS2P0C7Q2 107 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
SNX6-205ENST00000555648 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
SNX6-205ENST00000555648 A0A087WWC5 75 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 GRIFINA4D1Z8 144 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 KRBOX1C9JBD0 128 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 FHITP49789 147 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 DMRTA1Q5VZB9 504 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
SNX6-205ENST00000555648 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
SNX6-205ENST00000555648 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 SMLR1H3BR10 107 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 M0R381 172 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 TOR2AQ5JU69 321 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 Q6ZSN1 163 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 JPT2Q9H910 190 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
SNX6-205ENST00000555648 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 G3V3Q6 166 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 PAGE4O60829 102 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 PFDN1O60925 122 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 CRIP1P50238 77 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 LAGE3Q14657 143 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 KCNRGQ8N5I3 272 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 FRZBQ92765 325 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 SAMD10Q9BYL1 202 aa10.35□□□□□ -0.75
SNX6-205ENST00000555648 RYR1P21817 5038 aa10.34□□□□□ -0.75
SNX6-205ENST00000555648 TRAV8-3A0A0A6YYJ7 113 aa10.34□□□□□ -0.75
SNX6-205ENST00000555648 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
SNX6-205ENST00000555648 A0A1B0GV50 99 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms