RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 MED14OSP0DP75 135 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 APOC4P55056 127 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 CACNG7P62955 275 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 FABP9Q0Z7S8 132 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 SPANXN1Q5VSR9 72 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 TMEM136Q6ZRR5 245 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 Q8N3U1 123 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 OR10AG1Q8NH19 301 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 TRGC2P03986 189 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 PRM2P04554 102 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 GIG44P09565 113 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 IGHV4-30-4P0DP06 118 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 RNASE3P12724 160 aaKnown RBP7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 NTF3P20783 257 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 LINC00467Q9BRT7 94 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 MDFICQ9P1T7 246 aa7.03□□□□□ -1.28
HNRNPC-220ENST00000555585 COL6A5A8TX70 2615 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 ANK2Q01484 3957 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 M0R381 172 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 HLA-DQA1P01909 254 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 APCSP02743 223 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 MT-ND6P03923 174 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 KIR2DL5BQ8NHK3 375 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 MSRB1Q9NZV6 116 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 TRRAPQ9Y4A5 3859 aa7.02□□□□□ -1.29
HNRNPC-220ENST00000555585 AZU1P20160 251 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 RAB5BP61020 215 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 ZFP82Q8N141 532 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 CSNK1G2-AS1Q8NCQ2 148 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 RCHY1Q96PM5 261 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 GSN-AS1Q9NRJ2 163 aa7.01□□□□□ -1.29
HNRNPC-220ENST00000555585 IGHV4-4A0A075B6R2 117 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 UBE2CO00762 179 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 TRGC1P0CF51 173 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 RRN3P1Q2M238 152 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 KIAA1644Q3SXP7 199 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 GATD1Q8NB37 220 aa7□□□□□ -1.29
HNRNPC-220ENST00000555585 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 SLAQ13239 276 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 DEFB135Q30KP9 77 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 ZNF705AQ6ZN79 300 aaPredicted RBP6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 SPXQ9BT56 116 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
HNRNPC-220ENST00000555585 A8MZ25 164 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 M0R2P5 195 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 NXPH4O95158 308 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 PRB2P02812 416 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 SMIM17P0DL12 118 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 EVI2AP22794 236 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 FAM104BQ5XKR9 115 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 C11orf72Q8NBR9 251 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 AP1S3Q96PC3 154 aa6.98□□□□□ -1.29
HNRNPC-220ENST00000555585 PHOX2AO14813 284 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 MGPP08493 103 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 MRPL51Q4U2R6 128 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 RNASE8Q8TDE3 154 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 MUC4Q99102 2169 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 JPT2Q9H910 190 aa6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 MRPL16Q9NX20 251 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-220ENST00000555585 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BKO60814 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 S100A6P06703 90 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BJP06899 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 RAB4AP20338 218 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BOP23527 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 SRIP30626 198 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BBP33778 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 NDUFA6P56556 154 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BDP58876 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST1H2BCP62807 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST2H2BEQ16778 126 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 DEFB121Q5J5C9 76 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 KPRPQ5T749 579 aaPredicted RBP6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 Q6ZWC4 215 aa6.96□□□□□ -1.3
HNRNPC-220ENST00000555585 OR11H2Q8NH07 326 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms